Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1263 ATGAATGAATTTGATCGAATCGTGATAAAGAAGCATTGGAAATTATGGAAAGAGAGTGAGTTTGAGTTTGATGAGGAAGAGTATGAGAGAGGATACATAAAGAAGGGGCCATGGAGTAGTGAGGAAGATGAAGTGCTATCAAGACACGTAAGCAAATATGATTCTAGGGAATGGATCTCCATTCGATCCAAAGGCTTCTTTCCCCAAACTGAAAAATCTTGTCACCTTAGATGGGTTAATGAACTTAGACCCAACTTGAAGACTGGATGCAAGTTTACAGGGGAAGAAGAAAGGTTGGTGATAGAATTACAGGCACACTTTGGGAACAAATGGGCTAAATTTGCAATGTATTTGCAAGGGAGAACGGACAATGATAGCAGTAGGAGAAAGAGGTTGGAGAGGATGTTGCAGAAGCCACCAACTTCGTCAAAGCCTAAAAAAAACAAAGGAAAAACTCCTCCTCTTAATCAAGTGCAAGTGGACAATAAGGTATAA 495 0.4 MNEFDRIVIKKHWKLWKESEFEFDEEEYERGYIKKGPWSSEEDEVLSRHVSKYDSREWISIRSKGFFPQTEKSCHLRWVNELRPNLKTGCKFTGEEERLVIELQAHFGNKWAKFAMYLQGRTDNDSSRRKRLERMLQKPPTSSKPKKNKGKTPPLNQVQVDNKV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1263 164 SMART sant 34 84 IPR001005 -
Aed2g1263 164 SMART sant 88 138 IPR001005 -
Aed2g1263 164 Pfam Myb-like DNA-binding domain 38 88 - -
Aed2g1263 164 Gene3D - 34 87 - -
Aed2g1263 164 Pfam Myb-like DNA-binding domain 91 125 IPR001005 -
Aed2g1263 164 MobiDBLite consensus disorder prediction 123 137 - -
Aed2g1263 164 PANTHER MYB TRANSCRIPTION FACTOR 27 160 - -
Aed2g1263 164 MobiDBLite consensus disorder prediction 123 164 - -
Aed2g1263 164 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 125 IPR017930 -
Aed2g1263 164 Gene3D - 90 157 - -
Aed2g1263 164 PANTHER TRANSCRIPTION FACTOR DUO1 27 160 - -
Aed2g1263 164 MobiDBLite consensus disorder prediction 141 164 - -
Aed2g1263 164 CDD SANT 91 125 IPR001005 -
Aed2g1263 164 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Aed2g1263 164 SUPERFAMILY Homeodomain-like 33 125 IPR009057 -
Aed2g1263 164 CDD SANT 37 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1263 Aed-Chr2 11460399 11461093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1263 33 137 MYB Transcription Factor Family AT3G60460 66.364 1.53e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g1263 Myb_DNA-bind_6 2.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1263 K09422 - gmx:100793689 190.66