Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1258 ATGGATTTTGATCAGAGCTTCAAAGGGCCAAAATTCCTTTCAGGCCTTTTCCCTAGAAACCATCCCAACTTGATGCCACAAACTCAAACACTGTTTCCTTTGTCACCGTCGTCATCATCACCATCACCACCTTTCTTATATTATCCCAACAACACTATTAACTTTTTTCAAAACCATGTAAAGGAAAATGTGCCTGCCCAAAACCCTCTTTTTCTGATGAATAATGGTCCTTCCAACCCCATCACCAGCCCTATGTATGGGATACCAACCCCTTCTTTGGGTGGTGGATCATCTTTCCTAGGTGGCTTTGGCAACATTCATCGTCCTTCTTCTTCAAAATCACCATCACCTCTTTCTCTCTCTAATGTGTATGAACGAGGGATGAGGGAATATTATCACCAGAACGTTGATTGGGAGGAAAAGATGAAAAATGATGCCGACATTGCTAATAATAACATAATCAAAGGGCATTGGACGTCAGAAGAAGACAGTGCTCTTGTGGAATTGGTGAATAGATTTGGACCGAAGAAATGGTCAGAAATTGAGAAGTTGTTGCATGGAAGGATTGGGAAACAATGCCGATGGACGGAGGAGGAAGACAACATTTTAGTCGAAGCCCATATGGAATTTGGCAATCGATGGGCAAAGATTGCAAATAGGTTGCATGGTAGGACTGAGAACACAATCAAGAACCATTGGAATTGCACCAAGAGGCACATTAAGCACAACAAGAACAACCAAACCTCTTATGAAGACTCAAAGCTCCATGCCTACATTAAGAAGCTACAAAAGTGA 795 0.4189 MDFDQSFKGPKFLSGLFPRNHPNLMPQTQTLFPLSPSSSSPSPPFLYYPNNTINFFQNHVKENVPAQNPLFLMNNGPSNPITSPMYGIPTPSLGGGSSFLGGFGNIHRPSSSKSPSPLSLSNVYERGMREYYHQNVDWEEKMKNDADIANNNIIKGHWTSEEDSALVELVNRFGPKKWSEIEKLLHGRIGKQCRWTEEEDNILVEAHMEFGNRWAKIANRLHGRTENTIKNHWNCTKRHIKHNKNNQTSYEDSKLHAYIKKLQK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1258 264 ProSiteProfiles Myb-like domain profile. 150 193 IPR001005 -
Aed2g1258 264 SUPERFAMILY Homeodomain-like 152 233 IPR009057 -
Aed2g1258 264 Gene3D - 195 263 - -
Aed2g1258 264 CDD SANT 158 194 IPR001005 -
Aed2g1258 264 PANTHER MYB DOMAIN PROTEIN 100-RELATED 135 254 - -
Aed2g1258 264 CDD SANT 194 237 IPR001005 -
Aed2g1258 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 191 241 IPR017930 -
Aed2g1258 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 150 190 IPR017930 -
Aed2g1258 264 PANTHER MYB PROTEIN-RELATED 135 254 - -
Aed2g1258 264 SMART sant 191 239 IPR001005 -
Aed2g1258 264 SMART sant 154 188 IPR001005 -
Aed2g1258 264 ProSiteProfiles Myb-like domain profile. 194 234 IPR001005 -
Aed2g1258 264 Pfam Myb-like DNA-binding domain 194 234 IPR001005 -
Aed2g1258 264 Gene3D - 148 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1258 Aed-Chr2 11296647 11298488 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1258 153 262 MYB Transcription Factor Family AT4G18770 49.206 5.21e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g1258 Myb_DNA-binding 4.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1258 K09422 - gsj:114405432 248.44