Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed2g1252 | ATGGAACCGGAAGAAACCGCCGCCACCGCCGCCGCCGACGGAAGCGGCGACGAGGGGCTGCTCGGATTAGACGGCGGAGGCAGCAGCGGAGGAAGGGACAGAGTCAAGGGTCCATGGTCGCCGGAGGAGGACGCCATTCTGAGCCGTCTCGTGAGCAAGTTCGGCGCCAGAAACTGGAGCCTCATCGCGCGGGGGATTAGCGGAAGATCCGGCAAGTCGTGCCGCCTCCGGTGGTGCAACCAGCTCGACCCCGCCGTTAAGCGCAAACCCTTCACCGATGAGGAGGACCGGATCATAGTTGCTGCTCATGAAATCTATGGGAACAAATGGGCAGCCATTGCCAGGCGTCTACAGGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCCACTCTGAGGCGTCGTGGAGTTGGACTTGATACGATTAAATTAGAATCTGGCAACTTCATGGAAGATGTTAGCTTGGAGAAAGCAAAAGCATCATCGGAAGACACTCTATCATGTGAGGATGTTTCTTTGAAGTCCTCAGAAGGGAGAGATGCCAGTTCTATGGAGATCATGGATGATAAATCTGACAACAAAGCACAAACTGAGGGTCAATTACACCATGAAGCCAAGGACCCACCTACCCTTTTCCGGCCAGTACCACGCGTGAGTGCTTTTAATGTGTATCACTCATTTGATGGTATGCAGCCTTCAACATCAATTCAAAGACCTGTTCCGACGCAAGCACCCGCTTTACAATCATCAAAACCGGATATGGAATTTTGTAGAATGCTTGAAGGAATTTGTGGTGACCCGTCAGTGCCTCACCAGTGTGGCCATGGTTGCTGTGCTGCTCCAAATGGTAGAAAGTCCAAAAGCTCTCTGTTGGGACCAGAATTCATTGAATTTTCGGAACCTCCATCTTTCCCAAATTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAGTAGTAGTGCCAAAATGATGGGCAACCCCTCTGGCAACAGGGTTGTATCTAATGGATCTCAAGTACATATTGGCCATTAA | 1065 | 0.5033 | MEPEETAATAAADGSGDEGLLGLDGGGSSGGRDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVAAHEIYGNKWAAIARRLQGRTDNAIKNHWNSTLRRRGVGLDTIKLESGNFMEDVSLEKAKASSEDTLSCEDVSLKSSEGRDASSMEIMDDKSDNKAQTEGQLHHEAKDPPTLFRPVPRVSAFNVYHSFDGMQPSTSIQRPVPTQAPALQSSKPDMEFCRMLEGICGDPSVPHQCGHGCCAAPNGRKSKSSLLGPEFIEFSEPPSFPNFELAAIATDISNLAWLKSGLESSSAKMMGNPSGNRVVSNGSQVHIGH | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed2g1252 | 354 | SUPERFAMILY | Homeodomain-like | 33 | 129 | IPR009057 | - | |
Aed2g1252 | 354 | MobiDBLite | consensus disorder prediction | 333 | 354 | - | - | |
Aed2g1252 | 354 | MobiDBLite | consensus disorder prediction | 174 | 211 | - | - | |
Aed2g1252 | 354 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 87 | 137 | IPR017930 | - | |
Aed2g1252 | 354 | MobiDBLite | consensus disorder prediction | 169 | 213 | - | - | |
Aed2g1252 | 354 | SMART | sant | 35 | 84 | IPR001005 | - | |
Aed2g1252 | 354 | SMART | sant | 87 | 135 | IPR001005 | - | |
Aed2g1252 | 354 | Pfam | Myb-like DNA-binding domain | 39 | 96 | - | - | |
Aed2g1252 | 354 | Gene3D | - | 90 | 136 | - | - | |
Aed2g1252 | 354 | CDD | SANT | 38 | 80 | IPR001005 | - | |
Aed2g1252 | 354 | ProSiteProfiles | Myb-like domain profile. | 31 | 82 | IPR001005 | - | |
Aed2g1252 | 354 | Gene3D | - | 35 | 87 | - | - | |
Aed2g1252 | 354 | CDD | SANT | 90 | 133 | IPR001005 | - | |
Aed2g1252 | 354 | PANTHER | - | 1 | 331 | - | - | |
Aed2g1252 | 354 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 31 | 86 | IPR017930 | - | |
Aed2g1252 | 354 | PANTHER | MYB PROTEIN-RELATED | 1 | 331 | - | - | |
Aed2g1252 | 354 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Aed2g1252 | 354 | ProSiteProfiles | Myb-like domain profile. | 83 | 133 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed2g1252 | Aed-Chr2 | 11148569 | 11153612 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed2g1252 | 22 | 354 | MYB Transcription Factor Family | AT3G09230 | 51.453 | 2.12e-106 | 315 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Aed2g1252 | Myb_DNA-bind_6 | 1.3e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed2g1252 | K09422 | - | gmx:100811740 | 604.749 |