Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1248 ATGGCTTCGGAGGGTCATCTCTTCAACAACATCACACTCGGAGGCCGTGGAGGCACTAATCCAGGACAGATAAAAATATATCCTGGAGGAATTGTATGGAAAAGACAGGGTGGTGGAAAATTAATCGAAGTTGATAAATCTGACATAATGGGAGTGACATGGATGAAAGTACCAAGGACTAACCAACTTGGTGTTCAAATCAAAGATGGGTTGTACTACAAGTTCACAGGATTTCGTGACCAGGATGTTGTAAGTTTGACCAATTTTTTCCAGAACACCTGTGGAATATCAGTAGAAGAGAAGCAACTTTCTGTTAGTGGACGTAATTGGGGAGAAGTTGATCTAAATGGAAATATGCTGGCTTTCATGGTTGGTTCAAAGCAAGCTTTTGAAGTGTCTTTAGCAGATGTCTCTCAAACGCAGCTTCAAGGGAAGAATGATGTGATCTTGGAGTTTCATGTGGATGACACAACTGGAGCAAATGAAAAAGATTCACTGATGGAGATAAGTTTCCATATACCAAACTCCAACACCCAGTTTGTTGGTGATGAAAATCACCCCCCTGCTCAGGTTTTCCGTGACAAAATTATGTCTATGGCTGATGTTGGTGCTGGAGGTGAAGATGCTGTTGTTACATTTGAGGGCATTGCGATCCTTACACCAAGAGGACGATACAGTGTTGAGTTACACATGTCATTCTTGCGGCTTCAAGGACAGGCTAATGATTTCAAAATTCAGTATAGCAGTGTGGTTCGCCTATTTTTACTTCCTAAGTCTAATCAACCACATACCTTCGTCATTATTAGTCTTGATCCCCCTATTCGAAAGGGACAAACTTTGTACCCTCATATTGTGATGCAATTTGAAACTGATTATGTTGTTCAAAGTGAATTGGCAATAAATGATGATCTTTATAATTCAAAGTACAAGGACAAGTTGGAGCTCTCTTATAAGGGCCTTATTCATGAAGTGTTCACCACAATATTACGTGGTTTGTCTGGTGCCAAAGTGACCAAGCCCGGAAAATTTAGGAGTTGTCAAGATGGTTATGCAGTGAAATCATCTTTGAAAGCTGAAGATGGAATTCTGTATCCCCTTGAGAAGAGCTTCTTCTTTCTACCTAAACCTCCCACTCTTATTCTTCATGAAGAGATTGATTATGTGGAATTTGAACGGCATGCTGCTGGTGGCGCCAATATGCATTATTTTGATCTTCTTATCAGACTAAAATCTGAACAAGAGCATCTCTTCCGTAATATTCAGAGAAATGAGTACCACAATTTGTATGAATTTATCAGTTCAAAGGGCTTGAAAATTATGAACTTAGGAGATGCCCAACCTACTGCTGGTATAAAGAAGGTTCTTGAGAATGATGATGATGATGCTGTTGATCCACATCTTGAGCGCATCAGAAATGAAGCTGGTGTAGATGAAAGTGATGAGGAGGATTCTGATTTTGTTGCTGACAAGGATGATGAAGGTTCTCCTACTGATGATTCTGGTGGAGACGATTCGGATGGCAGTGATATTGGTGATGAGAAAGAGGCAAGTGATTTTTATTTGCCTTTAAGCCTGCCAAAAAGGAATCAAAGAAGGATCTGCCTTCTAAGGCATCTACTTCTAAAAAGAAATCAAAAGATGATGAAGATGGAAAGAAGAAAAAACAGAAGAAGAAAAAGGACCCAAATGCACCCAAGAGGGCAATGTCCAGTTTCATGTTCTATTCTAACTTGGAAAGAGAGGTGTGTTCTATTCTATGTCCTATTGGCTTTTGGATTTGGGTGTAATCTAAAGAAAACTAATCCTGGAATTTCATTTACGGATGTGGCAAGAGTACTTGGAGAGAAATGGAAAAAGATGTCAGTGGAAGAGAAGGAACCATACGAGTCAAAGGCACGCGAGGATAAAAAACGTTACAAGGATGAGATTAGTGGCTACAAGAATGTGCAACCCATGAACATTGATTCAGGAAACGAATCCGGCAGTGCCTAA 1992 0.4006 MASEGHLFNNITLGGRGGTNPGQIKIYPGGIVWKRQGGGKLIEVDKSDIMGVTWMKVPRTNQLGVQIKDGLYYKFTGFRDQDVVSLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLAFMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYSVELHMSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVQSELAINDDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGANMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKIMNLGDAQPTAGIKKVLENDDDDAVDPHLERIRNEAGVDESDEEDSDFVADKDDEGSPTDDSGGDDSDGSDIGDEKEASDFYLPLSLPKRNQRRICLLRHLLLKRNQKMMKMERRKNRRRKRTQMHPRGQCPVSCSILTWKERCVLFYVLLAFGFGCNLKKTNPGISFTDVARVLGEKWKKMSVEEKEPYESKAREDKKRYKDEISGYKNVQPMNIDSGNESGSA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1248 663 MobiDBLite consensus disorder prediction 620 644 - -
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 375 392 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 417 435 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 265 281 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 357 375 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 220 236 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 401 417 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 242 258 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 PRINTS Structure-specific recognition protein signature 330 343 IPR000969 GO:0003677|GO:0005634
Aed2g1248 663 MobiDBLite consensus disorder prediction 649 663 - -
Aed2g1248 663 PANTHER FACT COMPLEX SUBUNIT SSRP1 4 660 - -
Aed2g1248 663 MobiDBLite consensus disorder prediction 470 511 - -
Aed2g1248 663 Pfam Histone chaperone Rttp106-like 351 440 IPR013719 -
Aed2g1248 663 Gene3D - 96 180 IPR038167 -
Aed2g1248 663 MobiDBLite consensus disorder prediction 620 663 - -
Aed2g1248 663 Gene3D - 340 449 IPR011993 -
Aed2g1248 663 Gene3D High mobility group box domain 586 656 IPR036910 -
Aed2g1248 663 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 596 647 IPR009071 -
Aed2g1248 663 Pfam HMG (high mobility group) box 596 647 IPR009071 -
Aed2g1248 663 SUPERFAMILY HMG-box 599 648 IPR036910 -
Aed2g1248 663 Pfam Structure-specific recognition protein (SSRP1) 107 175 IPR024954 -
Aed2g1248 663 PANTHER FACT COMPLEX SUBUNIT SSRP1-B 4 660 - -
Aed2g1248 663 SMART hmgende2 579 648 IPR009071 -
Aed2g1248 663 Gene3D - 2 93 IPR011993 -
Aed2g1248 663 MobiDBLite consensus disorder prediction 496 511 - -
Aed2g1248 663 CDD PH2_SSRP1-like 343 442 - -
Aed2g1248 663 SMART Rtt106_2 349 442 IPR013719 -
Aed2g1248 663 Pfam POB3-like N-terminal PH domain 8 100 IPR035417 -
Aed2g1248 663 CDD HMGB-UBF_HMG-box 596 644 - -
Aed2g1248 663 CDD PH1_SSRP1-like 208 341 - -
Aed2g1248 663 Gene3D - 200 339 - -
Aed2g1248 663 SUPERFAMILY PH domain-like 207 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1248 Aed-Chr2 11035196 11042351 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Aed2g1248 POB3_N 4.4e-22 CL0266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1248 K09272 - gmx:100780190 1073.15