Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1216 ATGATAGTTGCTATGGACTTGAATGCCTCGCCGGTTCCGGAGGAAGATGAAGATATTTTTGAGGAGAAGATACATGTTGAAGAGTTTCATGCACCTGAAGAACGCATAGAAACTGGAGCTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGGTTGAAGAGAGAGCGACCGGATGATAGACCTGTACATGTGTCACAGACACCTGGATACGATCAGCCATTTCATACTAAGAACCAAAAATCATATGATAAAAGCAGGCTTCCTCCTGGTTCTTCAATGCAGGCTATGGCAGCTGTGAGACATGGGGAGTTCATGGTGTCTGCAATGGCCATGGGGGAATGTCTCTTGAGAAGAAAGAGACAAAGAGGATGGCTGGATTGCCCTTCATTTGGCCAGGAAATTTGTTTCATGATACCTTCTAAGGTTCCACTTGGTGAATCATTCAATGACTGCATTATTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACAAATACCACACGATACTATCCTGTGACAGATTTAAAAAAAGATTGCATCAAGCATGTTAAGATTCAATGCAGGGGGCGTGATTCTGTACCTGATAATTTATCTGTGAACCAGTTCGTGTATGAGGTTACACAATTTTTGTCACGTCAAAAGCACTCAAAGAAGTTTATACTTGTTCATTGTACACATGGACATAATCGTACAGGATACATGATCATCCACTATTTAATGCGTGCTATGTCAATGTCTGTTACTCAGGCAATAAAAGTATTTTCAGAAGCTCGCCCTCCAGGAATCTACAAACCTGATTACATTGATGCATTGTATGCATTTTATCATGAGAAAAAGCCTGAAATGGTAGTTTGTCCACCGACTCCAGAGTGGAAGAGATCTTCTGAATTTGATCTCAATGGTGAAGCTGTTCCAGATGATGATGATGATGGAGTACCAGGCCCTGATTTGCAGGCCAGGGGACACACACAATTTCCAGGTTCACACCCAGTTTCTCTCAACAGGGATAATTTGCAATTGTTACGACAACGCTATTATTATGCAACATGGAAAGCAGATGGTACAAGATATATGCTGCTAATAACAATGGATGGATGTTACTTGATTGACAGAAATTTTAGTTTCCGAAGGGTCCAAATGAGATTTCCTTGCAGAAGTGCAAATGATGTGAGGAGGAAAGACTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAAAGAATTCATTAAAAGACTCTCACATGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATATACCGCGTACTCATGAAGGACTCTTGAAGTGGAAATATGCTTATCTGAATTCAGTTGATTTTCTTTTTGAGGTTGATGGTGACCGTGAGCTACTTTTTCTCTATGAACGGGGAAAGAAGAAACTCTTGGAAGGGAATAGGGTTGAATTCACAGATGGTTCAGATCCCTCACTTTATTCTGGAAAGATCATTGAATGTTCTTGGGATTTTGACAAACTGGAATGGAAGTTTTTGCGAATCAGAACAGATAAATCAACTCCGAATGAGTTTAATACTTACAGGAAGGTGATGCGAAGCATAAGAGACAACATCACCGAGGAAGATTTGTTGAATGAAATAAGTGAGATAATTCGCCTTCCCATGTATGCCGATAGGATCAAAATTGATAGTAAAGCAAATCAGCATGCTAATGTCGCAAGGCGGAGGTGA 1770 0.4056 MIVAMDLNASPVPEEDEDIFEEKIHVEEFHAPEERIETGADIARREREERKRRLKRERPDDRPVHVSQTPGYDQPFHTKNQKSYDKSRLPPGSSMQAMAAVRHGEFMVSAMAMGECLLRRKRQRGWLDCPSFGQEICFMIPSKVPLGESFNDCIIPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVTDLKKDCIKHVKIQCRGRDSVPDNLSVNQFVYEVTQFLSRQKHSKKFILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKVFSEARPPGIYKPDYIDALYAFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGVPGPDLQARGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMLLITMDGCYLIDRNFSFRRVQMRFPCRSANDVRRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDDPYIPRTHEGLLKWKYAYLNSVDFLFEVDGDRELLFLYERGKKKLLEGNRVEFTDGSDPSLYSGKIIECSWDFDKLEWKFLRIRTDKSTPNEFNTYRKVMRSIRDNITEEDLLNEISEIIRLPMYADRIKIDSKANQHANVARRR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1216 589 Gene3D Protein tyrosine phosphatase superfamily 119 330 IPR029021 -
Aed2g1216 589 PANTHER MRNA-CAPPING ENZYME 119 337 - -
Aed2g1216 589 PANTHER MRNA-CAPPING ENZYME 3 93 - -
Aed2g1216 589 SUPERFAMILY Nucleic acid-binding proteins 463 573 IPR012340 -
Aed2g1216 589 Pfam mRNA capping enzyme, C-terminal domain 494 557 IPR013846 -
Aed2g1216 589 PANTHER MRNA-CAPPING ENZYME 337 408 - -
Aed2g1216 589 PANTHER MRNA-CAPPING ENZYME 409 589 - -
Aed2g1216 589 MobiDBLite consensus disorder prediction 30 92 - -
Aed2g1216 589 CDD Adenylation_mRNA_capping 336 460 IPR001339 GO:0004484|GO:0005524|GO:0006370
Aed2g1216 589 SMART dsp_5 154 296 IPR020422 GO:0006470|GO:0008138
Aed2g1216 589 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 339 460 - -
Aed2g1216 589 MobiDBLite consensus disorder prediction 321 348 - -
Aed2g1216 589 Coils Coil 588 589 - -
Aed2g1216 589 CDD RNA_5'-triphosphatase 125 291 - -
Aed2g1216 589 Pfam Dual specificity phosphatase, catalytic domain 174 294 IPR000340 GO:0008138|GO:0016311
Aed2g1216 589 ProSitePatterns Tyrosine specific protein phosphatases active site. 241 251 IPR016130 GO:0016311|GO:0016791
Aed2g1216 589 Pfam mRNA capping enzyme, catalytic domain 348 405 IPR001339 GO:0004484|GO:0005524|GO:0006370
Aed2g1216 589 Pfam mRNA capping enzyme, catalytic domain 408 459 IPR001339 GO:0004484|GO:0005524|GO:0006370
Aed2g1216 589 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 125 311 IPR029021 -
Aed2g1216 589 Gene3D DNA ligase/mRNA capping enzyme 407 459 - -
Aed2g1216 589 Gene3D DNA ligase/mRNA capping enzyme 334 406 - -
Aed2g1216 589 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 119 337 - -
Aed2g1216 589 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 337 408 - -
Aed2g1216 589 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 93 - -
Aed2g1216 589 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 409 589 - -
Aed2g1216 589 MobiDBLite consensus disorder prediction 30 64 - -
Aed2g1216 589 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 219 288 IPR000387 GO:0016311|GO:0016791
Aed2g1216 589 Gene3D - 494 566 IPR012340 -
Aed2g1216 589 ProSiteProfiles Dual specificity protein phosphatase domain profile. 151 300 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1216 Aed-Chr2 10639208 10655089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1216 409 589 Protein tyrosine phosphatase (PTP) family AT3G09100 70.879 3.93e-78 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1216 K13917 - gmx:100776633 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1216 2 10639208 10655089 Aed2g1216 2 10639208 10655089 ECH