Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1211 ATGAACAACAGAAAATACGAAGTGTTCTTGAGTTTCAGAGGAGAAGACACGCGTGCTACTTTCACTTCACATCTCTATGCCTCTCTTCTTAACGCAGGAATCAATGTTTTCAAGGATGACGAATCTCTTTCAAGGGGAGATCAGATTAAAGATTCACTGCTGCTAGCAATCGAACAGTCTCAGATTTCTATTGTTGTATTCTCCACAAATTATGCAGATTCGCGATGGTGCTTGCAAGAGTTGGAGAAAATAATGTATTGTCGAAGTACCATAGGACAGGTAGTTCTCCCAGTGTTCTACGATGTTGATCCCTCGGAAGTACGCAATCAAACTGGCCGCTTTGGAAAAGCATTTGAAGACCTTTCCAACAGGATTTTTAAAGATGGTGATGAAGATGAGAAAGGGGATGAAGAGGGTGAATCTTCTGACAAGGAGTATATGATGAGCAGGGTTTTCATACGTCGTTGGAAGAAGGTGCTTCATGAGGCTGCAGGCATCGCTGGGGTTGTAGTTCTAAATTCCAGGAATGAAAGTGAGATTATAAAAAATATTGTTGAAAATGTTACACGTTTGTTAGACAAGATAGAGTTGCCCCTTGTGGATAATCCAGTGGGAGTAGAATCTCGAGTTCAAGACATGATTGAGCTATTAGACCTAGATCACAAATTATCAAAATCAAATGATGTTTTACTATTAGGAATGTGGGGCATGGGAGGCATTGGTAAAACAACAATTGCAAAAGCCATTTACAATAAGATTGGCCGTAATTTTGAGGGAAGGAGCTTTCTTGAACAAATTAGGGAACTTTGGAGTCAAGACGCTGTTAGTTTCCAAGAACAACTTCTTTTTGATATCAACAAAGAAACAAAAAGAAAGATACATAATGTTGACCTGGGAAAACATGCTTTGAAGGAAAGACTTTGCAGTAAAAGGGTATTTATTGTTCTTGATGATGTGAATGATGTGGAACAATTGAGTGCTTTGTGTGGAAGTCGTGAATGGTTTGGTCCAGGAAGTAGAATAATCATCACAACTAGAGATAATCATATTCTCAGAGGGGGTAGAGTTGACAAAGTGTACACAATGAAAGGAATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCAAGAGAAGATTTTGCCGAACTTGCAAATAGTGTAATTGCATATTCTGGGGGTTTGCCGCTAGCTCTTACAGTCCTTGGGTGTCATTTGTTTGATATGAAGATAATAGAATGGAAGGCTGTATTAGAGAAACTTAAGAGAATTCCTCATGATGAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAAAGAGACATATTTCTTGATATAGCTTGTTTCTTTATTGGAATGGATCGAAATGATGTTATATGTATATTAAATGGTTGTGAACTTTTTCCAGAAAATGGATTACGCGTTCTCGTAGAGCGAAGTCTTGTAACTATTGATAATAAGAACAAACTTAAAATGCATGATTTGTTACGAGACATGGGAAGAGAAATTATTCGTGCAAAATCACCGAAAGATATTGAGGAGCGTAGCAGATTATGGTTTAATGAGGATGTGCTTAATGTATTAGCAAAAAAAATTGGAACCAAAACCATTGAGGGTCTGGCTTTGAAGTTACCGGTAACTAATTCAAAATGTTTGAGCACTGAAGCATTTAAGGAGATGAAGAAACTCAGGTTACTTCAACTTGCTGGTGTACAACTTGATGGGGATTTTGAATATCTTTCCAAGGATCTGAGATGGCTTAGTTGGCATGGATTTTCTTTAAAATGCATGCCCAAAAACTTTTATCAAGAAAGTTTAGTTTCCATTGAGTTAGAAAATAGTAACCTTAAACATGTGTGGAAAGAGGCCCAGCTGATGGAGAAATTGAAAATTCTCAATCTTAGTCATTCTCACTCTTTAACACAGACTCCAGACTTTTTAAATTTGCCTAATTTGGAAAAGCTAATGCTCATAGATTGTCCAAGGTTGTCTGAGATCTCCCATACGGTTGGCCATCTCAATAAAATTCTTATGATAAATTTGAAGGATTGTATTGGCCTTCGTAACCTTCCAAGAAGTATTTACAAGTTGAAATCTCTTCAAACACTCGTTCTTTCTGGATGTTTGAAGATCGACAAGTTGGAAGAGGACTTGGAACAAATGGAGTCTTTAACAACCCTTATTGCGGATAACACTGCAATAACAAAAGTGCCATTTTCAATAGTAACATCAAAAAGTATTGGATATATTTCTTTGTGCGGCTATGAAGGATTCTCCCGTGATGTATTTCCTTCTATCATTTTTTCGTGGATGTCGCCAACGAGCCATCTTTCATCCCACATTCAAGCATTTGCAGGCATGTCATCTCCCATTTCTTTACATGTGGCAAATAATAGTTCCCATAATCCATTATCTGTTTTCGAGGACCTTCCAAAGCTTCGAAGTCTTTGGATAGAGTGCAACTCTAAACTTCAACTATTTCAAGAAAGAACAATCATTTTAGATGCTTTATATGCCACAAATTCTAAAGAATTGGAATCGACTGCAACTACATCACAATTACCAAATATGAACGCTTCGGCTTTAAGTGAATGCAACAATCAAGTGTCCATTTCAGGTTCAAAAGGTTCCTTGACATCTCTTTTAATTCAAATGGGAATGAGTTGCCAAGTCACCCATATTCTTAAGGAGAGCATTTTACAGAATAGGAATACTAGTGAGAACGGCGGTTGTTTGCTCCCTGGTGATAATTATCCAGATTGGTCAACTTTCTACGGAGAAGATTCTTCTGTGATTTTTGAAATTCCTCAAGTGAACAAACGTAAATTGAAGACAATGATGTGTCATGTCCATTATTCTTGCCCAGTCAATATAACTACAAATGTCTTGAAAAACTTGTTGGTGATAAATCACACGAAGACCACCATTCAAATTTATAAGAGTGATGCATTAGCCTCCTTAGAAGATGAGGAGTGGCAAAGGATATTATCAACTATGGAGCCCGGTAACAAAGTGGAAATTGTTGTTGTTTTGGAGAGCAGATCAATTGTTGTTCACAAGACCACGATTTATCTCATATACGAGTCAATTGATGAAAAAACAGAGCACTGTCATGCGCCAAACAAGAATGTAATTGTTTCTAATGATGATGAAAATGTATGTGTTGTCAAGTCAATCTCTCAAGTGAAATTCAAGGATGATGTAGGGTGTGTTCCAGTCAAAAGAGTCAAACTTGATTCTTGTAGTGGTCATAAATCTTGTATTGGTGCTATTGTTTGTGTTGGATTGACCAACGATGATTTTGGCAGTGGATTAGTGGTTTTACATGTGGAAACTGGTTTTTGGCTTTGGGATATTGGTTTCTATGGAGTTCAACTTGGGCTTGATTCTAGGTATGATGACACATAA 3447 0.3719 MNNRKYEVFLSFRGEDTRATFTSHLYASLLNAGINVFKDDESLSRGDQIKDSLLLAIEQSQISIVVFSTNYADSRWCLQELEKIMYCRSTIGQVVLPVFYDVDPSEVRNQTGRFGKAFEDLSNRIFKDGDEDEKGDEEGESSDKEYMMSRVFIRRWKKVLHEAAGIAGVVVLNSRNESEIIKNIVENVTRLLDKIELPLVDNPVGVESRVQDMIELLDLDHKLSKSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLEQIRELWSQDAVSFQEQLLFDINKETKRKIHNVDLGKHALKERLCSKRVFIVLDDVNDVEQLSALCGSREWFGPGSRIIITTRDNHILRGGRVDKVYTMKGMDESESIELFSWHAFKQASPREDFAELANSVIAYSGGLPLALTVLGCHLFDMKIIEWKAVLEKLKRIPHDEVQKKLKISYDGLSDDTERDIFLDIACFFIGMDRNDVICILNGCELFPENGLRVLVERSLVTIDNKNKLKMHDLLRDMGREIIRAKSPKDIEERSRLWFNEDVLNVLAKKIGTKTIEGLALKLPVTNSKCLSTEAFKEMKKLRLLQLAGVQLDGDFEYLSKDLRWLSWHGFSLKCMPKNFYQESLVSIELENSNLKHVWKEAQLMEKLKILNLSHSHSLTQTPDFLNLPNLEKLMLIDCPRLSEISHTVGHLNKILMINLKDCIGLRNLPRSIYKLKSLQTLVLSGCLKIDKLEEDLEQMESLTTLIADNTAITKVPFSIVTSKSIGYISLCGYEGFSRDVFPSIIFSWMSPTSHLSSHIQAFAGMSSPISLHVANNSSHNPLSVFEDLPKLRSLWIECNSKLQLFQERTIILDALYATNSKELESTATTSQLPNMNASALSECNNQVSISGSKGSLTSLLIQMGMSCQVTHILKESILQNRNTSENGGCLLPGDNYPDWSTFYGEDSSVIFEIPQVNKRKLKTMMCHVHYSCPVNITTNVLKNLLVINHTKTTIQIYKSDALASLEDEEWQRILSTMEPGNKVEIVVVLESRSIVVHKTTIYLIYESIDEKTEHCHAPNKNVIVSNDDENVCVVKSISQVKFKDDVGCVPVKRVKLDSCSGHKSCIGAIVCVGLTNDDFGSGLVVLHVETGFWLWDIGFYGVQLGLDSRYDDT 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1211 1148 Pfam TIR domain 5 125 IPR000157 GO:0007165
Aed2g1211 1148 Pfam NB-ARC domain 219 444 IPR002182 GO:0043531
Aed2g1211 1148 Gene3D Ribonuclease Inhibitor 704 905 IPR032675 -
Aed2g1211 1148 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1039 IPR044974 GO:0006952
Aed2g1211 1148 Coils Coil 724 744 - -
Aed2g1211 1148 Gene3D Ribonuclease Inhibitor 525 703 IPR032675 -
Aed2g1211 1148 Gene3D - 364 448 IPR042197 -
Aed2g1211 1148 SUPERFAMILY L domain-like 555 894 - -
Aed2g1211 1148 SMART till_3 5 166 IPR000157 GO:0007165
Aed2g1211 1148 PRINTS Disease resistance protein signature 637 653 - -
Aed2g1211 1148 PRINTS Disease resistance protein signature 231 246 - -
Aed2g1211 1148 PRINTS Disease resistance protein signature 306 320 - -
Aed2g1211 1148 PRINTS Disease resistance protein signature 399 413 - -
Aed2g1211 1148 Gene3D - 1 197 IPR035897 -
Aed2g1211 1148 Gene3D - 198 357 IPR027417 -
Aed2g1211 1148 ProSiteProfiles TIR domain profile. 4 192 IPR000157 GO:0007165
Aed2g1211 1148 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 15 1039 - -
Aed2g1211 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 459 IPR027417 -
Aed2g1211 1148 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 168 IPR035897 -
Aed2g1211 1148 SUPERFAMILY "Winged helix" DNA-binding domain 434 541 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1211 Aed-Chr2 10605688 10612677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1211 2 754 WRKY Transcription Factor Family AT4G12020 30.759 9.27e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1211 - - gmx:100808753 1838.93