Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1201 ATGTCTTTCTCCGATTCCGATTCAGATCGCCATGATGACGAGGTGGGGCTGGACTTTCTAGATCTCCATGAACGGTACTCGGACAATAACAACAACAACAGAAACAGAAAGTATGAAGTGTTTTTGAGTTTCAGAGGCGAAGACATACGTGCGTCTTTCACTTCACATCTCCATGCCTCTCTAAAAAACGCGGGAATCATTGTTTTCAAGGATGACGAGTCGCTTCGAGTTGGAGATCACATCTCAGCCTCACTGCGGCTAGCAATCGAACAGTCTCAAATTTCTGTTATTGTGTTCTCGAGAAATTATGCAGAGTCGCGATGGTGTATGAAGGAGTTGGAGATAATAATGGAGTGTCACAGAACCATAGGGCAGGTGGTCGTGCCAGTGTTCTACGATGTTGATCCCTCTGAAGTTCGTCATCAAACTGGACTCTTTGGAAAAGCATTTCAAAACCTTTTGAACAAAATTTTACAAGAAGAAGACGAGAATGAAGAGTGTGCGGTACTAGATTGGAGGGAGGCACTTCGCCAGACAAATAGCCTCATAAATTCCAGTGAAAATATGGAGATTGCTAATAAAATAGAGTTATATGTGCCGTATCTGAGGCGGGGAGTTTGTACAGAGGCAGGCATCCCAGGGGTTGTCTTAAATTCCAGGAGAATGGAGATTGAGATGGATCTCCTTATGAAGCGTTGGAGGGAGGCACTTTCTGAAGCTGCTGGCATCTCAGGGATTGCAGTCTTGAATTCCAGTGTTATAGACCTCCTCGTGAATCGTTGGAGTGAGAAACTGCGTGAGGCTGCTCGCACCTTTAGGTTTGCAGTCATAAATTACAGTGGAGATTTGGATTATCCGATAACCTACAAGGCACGTGCTTGGACGGAGGCACTTCGTGAGGTTGCTGGTATATCAGGGTTGGTAGTCCTAAATTCCAGGAATGAAGCTAAGGCTATCAAGAACATTGTTAAAAATGTTATACGCTTGTTAGACAAGACTGAGTTGTTTGTTGCTGATAATCCAGTGGGAATAGAATCTCGTGTGCAAGATATGATTCATCTGTTAAACCATGGACCATCAAATGATATTCTACTTATAGGGATGTGGGGGATGGGAGGCATTGGCAAAACAACCATTGCAAAAGCTATTTACAATAAGATTGGTCGCAATTTTAAGGGAAGGAGTTTCCTTGCAAATATTAGAGAAATTTGGGAGCAAGAAGATGGCCCAGTTTGTTTACAAGAACAACTTCTCTTTGATATCTACAAAGAAACAAAAAAAAAGATACGCAATGTTGAGTCAGGAAAGAATATACTAAAGGAAACACGTTGTCATCAAAGGATACTTCTTGTCCTGGATGATGTGAATGAACTAGACCAATTGAATGCTTTGTGTGGAAGTCGTAATTGGTTTGGTCCAGGGAGTAAAATAATCATCACTACAAGAGATAAGCATATACTTAGAGGGAATAGAGTTGACAAAGTATACACCATGAAAGGAATGGATGAAAGTGAGTCAATTGAGCTTTTTAGCTGGCATGCATTCAAGAAAGCAAGTCCTAGGGAAGATTTCATTGAACTTTCTAGAAATGTAATTACATATTCCGGGGGATTGCCACTAGCTCTTGAAGTGCTTGGGTGTTATTTATTTGATATGGACATAAAAGAGTGGCAGAATGTATTGGAGAAACTCATGAGAATTCCGAATTATCAAGTACAAGAGAAGCTAAAAATAAGCTATGATGGTTTAAATTATGATAGTGAGAAAGAAATATTCCTCGATATAGCTTGCTTCTTTATTGGTATGGACCGATATGATGTTATACATATACTAAATGGTTGTGGACTTTTCGCAGAAGATGGAATACGTGTCCTTGTAGAGCGAAGTCTTGTAACAGTTGATGACAAGAATAAGCTTGGAATGCATGATTTGTTACGTGACATGGGAAGAGAAATCATTCGAACAAAATCTCCAAAGGAGCCCGAGGTGCGAAGTAGGTTATGGTGTAATGAGGATGTACTTGATGTATTGTCAAATGAAACGGGAACAAAAACTATTGAGGGACTAGGATTGAAGTTACCAAGAATTAATGCAAAATGTTTTCCCACTAAAGCTTTCGAGAATATGAGGAGACTTAGGTTGCTTCAACTTGGTGGTGTGCAACTTGCTGGAGATTTTCAATGTCTTTCAAAAAATCTCAGATGGCTTTGTTGGAATGAACTTCATTTACCATGCTTACCTACAAACTTTTATCAAGGAAGTCTCGTTTCTATTGAGTTAGAAAACAGCCATGTTAAATATTTGTGGAAAGAAACCCAGCTGATGGAGAGGTTGAAAATTCTCAATCTTAGTCATTGTCATTTTTTAACACAGACTCCAAACTTTTCATATTTGCCTAATATCGAAAAGTTAATGCTTATAGATTGTCCAAGCCTGTCAGAGATTTCCTACACCATTGGAGATCTTAAGAAAGTTCTTTTGATAAATTTGAAAGATTGTACTAATCTTCAGAAGCTTCCAAGAAGTATCTATGAATTGAAATCTCTTAAAACACTCATTCTTTCTGGATGTTTAAAGATTGATAAGTTGGAAGAGAACTTGGAACAAATGGAGTCTTTGACAATCCTTGTTGCAGATAAAACTGCAATAACACAAGTGCCCTTTTCAATAATAAGATCAAAAAGCATTGGATATATATCTTTGTGCGGTTATGAAGGATTGTCACACAATGTATTTCCTTCTATCATTTTGTCTTGGTTGTCACCAACGAGTAGTCTTCCATCCAATGTTCAAACATTTGCGGATATGTCTTCTCTTGTTTCCTTAGATTTGATCAATAGTAGTTCCTATAACCTATTCTCTATTTCCAAGGATCTTCCAAAGCTTCAAAAACTTTGGATAGAGTGCGGCTCAGAATATAAACTATCTCAAGAGACAAAAAGTATTTTAGATACTTTATATGCCACAAATTCTAAAGAATTGGAATCAATTGCAACTACATCACAAATATCAAATATGAATGTCCCAGCATCAGCTGAATGCAGCAAGCAAGTGCACATCTTAGGATCAAAAAGTTCTTTGAGATGTCTTTTATTTGAAATGGGAATGAATTGTCAAGTCCCTCATATTATGAAACAGAGCAATTTACAGATGAATATTAGTGAGCAAGGTGATTGTTTGTTCCCGGATGATAGTTATCCAAATTGGTTTACCTTTAACAATGAAGGTTCTTCTGTGAATTTTGAAATCCCTCATGTGATTGGATGTAACATGAAGACAATGATGTGCCATGTCCATTATTCTTCTCCAGACAATATAACTTCAGATGGCCTTAAAACTCTGATGGTGAAGAATCACACAAAAGCCACCATTATTCTTTATAAGAGAGAAGCATTAGCCTCCTTTCAAGCCGAGGAGTGGCAAAGGTTATTATCAAATATAGAGTCTGGTAACAAAGTAGAAATTATTGTTGTTTTTGGGAGCAGGTTTATTGTGAACATGACAACAATTTATCTCATATATGAGCCAATGGATGGAAAAGTGGAGCAGTGCCATGCACCAAATGAGAATTTCATTGCTTTTAGTGATGCCGAAAGTTTTGCAATCAAGTCCATCTCTCCTCAAGTGGAATCCTTGGATGACTCAAAACAAAAACAGAAAAGAAGAAAAATGGACTGA 3678 0.3812 MSFSDSDSDRHDDEVGLDFLDLHERYSDNNNNNRNRKYEVFLSFRGEDIRASFTSHLHASLKNAGIIVFKDDESLRVGDHISASLRLAIEQSQISVIVFSRNYAESRWCMKELEIIMECHRTIGQVVVPVFYDVDPSEVRHQTGLFGKAFQNLLNKILQEEDENEECAVLDWREALRQTNSLINSSENMEIANKIELYVPYLRRGVCTEAGIPGVVLNSRRMEIEMDLLMKRWREALSEAAGISGIAVLNSSVIDLLVNRWSEKLREAARTFRFAVINYSGDLDYPITYKARAWTEALREVAGISGLVVLNSRNEAKAIKNIVKNVIRLLDKTELFVADNPVGIESRVQDMIHLLNHGPSNDILLIGMWGMGGIGKTTIAKAIYNKIGRNFKGRSFLANIREIWEQEDGPVCLQEQLLFDIYKETKKKIRNVESGKNILKETRCHQRILLVLDDVNELDQLNALCGSRNWFGPGSKIIITTRDKHILRGNRVDKVYTMKGMDESESIELFSWHAFKKASPREDFIELSRNVITYSGGLPLALEVLGCYLFDMDIKEWQNVLEKLMRIPNYQVQEKLKISYDGLNYDSEKEIFLDIACFFIGMDRYDVIHILNGCGLFAEDGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRTKSPKEPEVRSRLWCNEDVLDVLSNETGTKTIEGLGLKLPRINAKCFPTKAFENMRRLRLLQLGGVQLAGDFQCLSKNLRWLCWNELHLPCLPTNFYQGSLVSIELENSHVKYLWKETQLMERLKILNLSHCHFLTQTPNFSYLPNIEKLMLIDCPSLSEISYTIGDLKKVLLINLKDCTNLQKLPRSIYELKSLKTLILSGCLKIDKLEENLEQMESLTILVADKTAITQVPFSIIRSKSIGYISLCGYEGLSHNVFPSIILSWLSPTSSLPSNVQTFADMSSLVSLDLINSSSYNLFSISKDLPKLQKLWIECGSEYKLSQETKSILDTLYATNSKELESIATTSQISNMNVPASAECSKQVHILGSKSSLRCLLFEMGMNCQVPHIMKQSNLQMNISEQGDCLFPDDSYPNWFTFNNEGSSVNFEIPHVIGCNMKTMMCHVHYSSPDNITSDGLKTLMVKNHTKATIILYKREALASFQAEEWQRLLSNIESGNKVEIIVVFGSRFIVNMTTIYLIYEPMDGKVEQCHAPNENFIAFSDAESFAIKSISPQVESLDDSKQKQKRRKMD 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1201 1225 SMART till_3 37 182 IPR000157 GO:0007165
Aed2g1201 1225 ProSiteProfiles TIR domain profile. 36 180 IPR000157 GO:0007165
Aed2g1201 1225 SUPERFAMILY L domain-like 641 968 - -
Aed2g1201 1225 Pfam TIR domain 37 194 IPR000157 GO:0007165
Aed2g1201 1225 Gene3D - 500 584 IPR042197 -
Aed2g1201 1225 Gene3D - 338 495 IPR027417 -
Aed2g1201 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 331 595 IPR027417 -
Aed2g1201 1225 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 44 1174 - -
Aed2g1201 1225 Gene3D - 266 337 IPR035897 -
Aed2g1201 1225 Gene3D - 31 201 IPR035897 -
Aed2g1201 1225 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 44 1174 IPR044974 GO:0006952
Aed2g1201 1225 Gene3D Ribonuclease Inhibitor 661 1056 IPR032675 -
Aed2g1201 1225 Pfam NB-ARC domain 346 568 IPR002182 GO:0043531
Aed2g1201 1225 PRINTS Disease resistance protein signature 535 549 - -
Aed2g1201 1225 PRINTS Disease resistance protein signature 442 456 - -
Aed2g1201 1225 PRINTS Disease resistance protein signature 365 380 - -
Aed2g1201 1225 PRINTS Disease resistance protein signature 773 789 - -
Aed2g1201 1225 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 182 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1201 Aed-Chr2 10507010 10514770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1201 290 890 WRKY Transcription Factor Family AT4G12020 32.415 1.48e-75 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1201 - - gmx:100808685 1459.89