Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1200 ATGAACCATCAGAGAATGTTCTACTTCTGGGGATGTGGGGGATGGGAGGCATTGGTAAAACAACCATTGCAAAGGCTATTTACAATAAGATTGGCCGCAATTTTGAGGGAAGAAGCTTCCTTGCAAATATTCGGGAAATTTGGGAGCAAGATAATGTCCAAGTCTGCTTACAAGAACAAGTTCTCTTTGATATCTTCAAAGAAAAAAAAAACAAAGATACATAATGTTGAGTCAGGAAAAAATATATTAAAGGAAACACTTTGTCATAAAAGAATACTTCTTGTATTGGATGATGTGAATGCATTGGACCAATTGAATGCCTTATGTGGAAGTCGTAAATGGTTTGGTCCAGGGAGTAGAATAATCATCACCACTAGAGATAAACATGTACTTAGAGGAAATAGAGTTGACAAAGTATACTCAATGAAAGGAATGAATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTATAGAAGATTTCATTGAACTCTCTAGAAATGTAATTACATATTCTGGGGGATTGCCACTAGCTCTTGAAGTGCTTGGGTGTTATTTATTTGATATGGACATAAAAGAGTGGCATAGTGCATTGGAGAAACTCAAGAGAATTCCTAATGGTCAAGTACACAAGAAGCTAAAAATAAGCTATGATGGTTTAAATGATGATAGTGAGAAAGAAATATTCCTCGATATAGTTTGTTTCTTTATTGGTATGGATCGAAATGATGTTATACAAATACTAAATGGTTGTGGACTTTTCGCAGAAAATGAAATACGTGTCCTTATAGAGCGAAGTCTTGTAACAATTGATGACAAGAACAAGCTTGGAATGCATGATTTGTTACAAGATATGGGAAGAGAAATCATTCGTGCAAAATCACCAAAGGAGCCTGAGGAGTGGAGTAGGTTATGGTTTCACGAGGATATACTTGATGTATTAACAAATGAAACAGGAACAAAAGCTATTGAGGGAGTGGGACTGAAGTTGCCACAAACTAATACAAAATTTTTATGCCTTAAAGCTTTTGAGAATATGAGGAAACTCAGGTTGCTTCAACTCAGTGGTGTACAACTTGTTGGAGATTTTAAATATCTTTCAAAAAATCTCAGATGGCTTTGTTGGCCCGGATTTCGGTCATCATGCATACCAACAAACTTTTATCAAGGAAATCTTGTTTCCATTGAGTTAGAAAACAGTAGTGTTAATTGCGTGTGGAAAGAAGCGCAGCTGATGGAGAGGCTAAAAATTCTCAATCTTACTCATTGCCATTTTTTAACACAAACTCCAGACTTTTCGTATTTGCCTAATCTTGAAAAGCTACTACTCATGGATTGTTGGAGTTTGTCTGAGATTTCTCACACTATTGGATCTCTCAATAAAGTTGTTATAATAAATTTGAAAGATTGTATTGGTCTTCTTAAGCTTCCAAGAAGTATTTATAAATTGAAATCTCTTGAAACACTCATTCTTTCTGGATGTTCAAAGATTGACAAATTGGAAGGGGACTTGGCACAAATGGAATCTTTGACAATCCTTATGGCAGATAAAAGTGCAATAACACAAGTGCCCTTTTCAATTATAAGATCAAAAAGCATTGGATATATTTCTTTGTGCGGTTATGAAGGATTTTCACACAATGTATTTCCTTCTATCATTTGGTCTTGGTGTTCACCATGGAGTAGTCTTTCGTCAAATGTTCAAACATTTGAGGGTATGTCATTTCTTGTTTCTTTAGATGTGGTAAATACTAGTTCCAATGATCTATTATCTATTTCCAAGGACCTTTCAAAGCTTCAAACTCTTTGGATAGATTGCGGCTCAAAATTTCAACTATCTCAAGATGCAAAAAGTATTTTAGATGTTTTATGTGCTGTGAATTCTAAGGAATTGGAACCGATTGCAACTACACCAGAAATACAAAATATGGATGCTCTAGAATCAACTATATGCAACAAGCAAGTGCAAATTCTAGGATCAAAAAGCTCATTGAGATGTCTTTTATTTGAAATGGGAATGAATTGTCAAGTCACCCATGTTACGAGACAAGGCAATTTACAGATGAATACTAGTGAGAAAGGTGGTTGTTTGCTCCCGGATGATAATCATCCAGATTGGTTTACCTTCAACAATGATGGTTCTTTTGTAAATTTTGAAATCCCTTATGTTATTGGACGCAATATGAAGACAATGATGTGCCATGTTCATTATTCTTCCCCAGACAATATAATATCTGATTGCCTAAACACTTTGATGGTGAAGAATCACACAAAAGCCACCATTGTGCTTTATAAGAGAGAAGCATTAGCCTCCTTTCAAGCTGAGGAGTGGCAAAGGTTAATATCAAATATAGAGCCCGGCAACAAAGTGGAAATTGTTGTTGTTTTTGGGAGCAGGTTTATTGTGAATATGACAACAATTTATCTCATATACGAGTCAATGGATGAAAAAATTGAGCATTGTCATGCACCAAATGAGAATGTCATTGTTTGTGATGCTGAAAGTTTTGCAATCAAGTCCATCTCTCCTCAAGTGGGATCCATGGATGACTCAAAACAAAAACTGAAAAGAAGAAAAATGGAGTGA 2607 0.3548 MNHQRMFYFWGCGGWEALVKQPLQRLFTIRLAAILREEASLQIFGKFGSKIMSKSAYKNKFSLISSKKKKTKIHNVESGKNILKETLCHKRILLVLDDVNALDQLNALCGSRKWFGPGSRIIITTRDKHVLRGNRVDKVYSMKGMNESESIELFSWHAFKQASPIEDFIELSRNVITYSGGLPLALEVLGCYLFDMDIKEWHSALEKLKRIPNGQVHKKLKISYDGLNDDSEKEIFLDIVCFFIGMDRNDVIQILNGCGLFAENEIRVLIERSLVTIDDKNKLGMHDLLQDMGREIIRAKSPKEPEEWSRLWFHEDILDVLTNETGTKAIEGVGLKLPQTNTKFLCLKAFENMRKLRLLQLSGVQLVGDFKYLSKNLRWLCWPGFRSSCIPTNFYQGNLVSIELENSSVNCVWKEAQLMERLKILNLTHCHFLTQTPDFSYLPNLEKLLLMDCWSLSEISHTIGSLNKVVIINLKDCIGLLKLPRSIYKLKSLETLILSGCSKIDKLEGDLAQMESLTILMADKSAITQVPFSIIRSKSIGYISLCGYEGFSHNVFPSIIWSWCSPWSSLSSNVQTFEGMSFLVSLDVVNTSSNDLLSISKDLSKLQTLWIDCGSKFQLSQDAKSILDVLCAVNSKELEPIATTPEIQNMDALESTICNKQVQILGSKSSLRCLLFEMGMNCQVTHVTRQGNLQMNTSEKGGCLLPDDNHPDWFTFNNDGSFVNFEIPYVIGRNMKTMMCHVHYSSPDNIISDCLNTLMVKNHTKATIVLYKREALASFQAEEWQRLISNIEPGNKVEIVVVFGSRFIVNMTTIYLIYESMDEKIEHCHAPNENVIVCDAESFAIKSISPQVGSMDDSKQKLKRRKME 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1200 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 239 IPR027417 -
Aed2g1200 868 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 64 818 - -
Aed2g1200 868 Gene3D - 41 139 IPR027417 -
Aed2g1200 868 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 818 IPR044974 GO:0006952
Aed2g1200 868 SUPERFAMILY L domain-like 285 612 - -
Aed2g1200 868 Pfam NB-ARC domain 66 224 IPR002182 GO:0043531
Aed2g1200 868 Gene3D Ribonuclease Inhibitor 291 673 IPR032675 -
Aed2g1200 868 Gene3D - 144 228 IPR042197 -
Aed2g1200 868 PRINTS Disease resistance protein signature 86 100 - -
Aed2g1200 868 PRINTS Disease resistance protein signature 488 504 - -
Aed2g1200 868 PRINTS Disease resistance protein signature 179 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1200 Aed-Chr2 10472838 10482070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1200 81 669 WRKY Transcription Factor Family AT4G12020 31.691 4.66e-62 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1200 - - gmx:100808753 1077