Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1199 ATGTCTCTCTCCGGTTCTGAATTTCCTTTCATCTCTTCAATGTCTCTCTCCAGTTCTGAATCCGATTCCAATTACTACGGGATGGAGATCGCCTCCTCCGATGGCGATGATGAGATGGAGATGGACTTTCTCCGGGAACGGTATTCGGAGGACAACAGAAATTATGATGTGTTTTTGAGTTTTAGAGGAGAAGACACGCGTCATTCTTTCATTTCACATCTCTATACCGCTCTTCAGAATGCTGGAGTCTTTGTTTTCAAGGATGACGAGACGCTTCCAAGGGGAAATCAAATTTCAGCCTCACTGCGGCTGGCAATCGAAGAGTCTCGAATTTCTGTTGTTGTTTTCTCGAGAAGTTATGCAGGGTCGCGATGGTGTTTGAAAGAGTTGGAAAAAATAATGGAGTGTCACAGAACAACAGGGCTGATGGTACTACCAGTGTTCTACGGTGTTGATCCCTCTGAAGTGCGTCATCAAACAGGTCACTTTGGGAAAGCATTTCAAAACCTTGAGAACAGAATTTTAAAAGTGAAAGACGAAAAGGATCTGGATTGGATGCAGCGATGGAAGAAGACACTTGGTGAGGCTGCTGGCATCTCAGGGCTTGTAGTCCGAAATTTCTGTGGTGAAATGGATATTCTTGATAAGATATATATCTTGGTGAAGCATTGGAGGGAGGCACTTTGTGAGTTGGTTGGCATCTCAAGGGGTGCTGCTGGCTCATATTCCAGGCTACAAGTGAAGATTGCTGACAAGATAGACCTCTTTGTGGACCATTGGAGGGACGGACTTTGTATTGCCACTTGCATCCCGTGGGGAGGAATGTTGATTGCTGAAAAGAAAATAGACCTGCTCGTGAAGCACTGGAAGGGGGCACTTTGTGAGGCACTTTGTGAGGTTGCAGTCCTAAATTCAAGTGGACAGATAGAGGTCGTTGATAAGACAAATCTCCTCGTGAAGCATTGGAGTGGGGCACTTCGTGAGGCTGTTGCCATCTCCGGGGGTGCATTCTTAAATTTCACAGGAGAATTGAAAATTGCTAATGAGATAGACCTCCTCGTGAAGCACTGGAGGGAGGCTCTTTGTGAGGTTGCTAAAAATGAAATCTCCGATGGTGCAGTCTTAAATTCTAGTGTTGAAAAGGAGATGGCTAGAGATTTTAATACCCTCGGGATGTATTGGGGGAAGGCACTTCGTGATGCTGCTTGCATCTGGAGGCTTGCAGTCCTAAATTCCAGAGGAGAAATGAAGATTGTTGCTGAAGAGAGTAACGTCTTTGTAAAGAAGCGTTGGATGGAAGAAGCACTTCGTGAGGCTGCTAGTATATCAGGAATTGTAGTCCTAAATTCCAGGAATGAAAGTGAGGCTATAAAAAGTATTGTAAAAAATGTTACACGTTTGTTAGACAAGACGGAGCTGTTCGTTGCCGATAATCCAGTGGGAGTAGAATCACGAGTGCAAGAAATGATTCAATTGTTAGATCAGAAACAATCAAATGACGTTCTACTACTAGGGATATGGGGAATGGGAGGTGTTGGTAAAACAACTATTGCAAAAGCCCTCTACAATAAGATTGGCCGCAATTTTGAGGGAAGGAGCTTCTTGGCACATATTAGGGAAGTTTGGGGGCAAGATGGTGGTCAAGTCTGTCTACAAGAACAACTTCTATTTGATATCGAAAAAGAAACAAACACAAAGATACGTAATGTAGAATCAGGAAAAAATATATTAAAAGAAAGACTACGCCATAAAAGGATTCTTCTTATACTTGATGATGTGAATAAATTGCATCAATTGAATGTGTTGTGTGGAAACCGAGATTGGTTTGGTCCAGGAAGTAGGATAATCATCACAACTAGAGATATGCATATTCTTAGAGGGAAAAGCATTGACAAAGTATTCACAATGAAAGGAATGGATGAAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGCAAGTCCAAGAGAAGATTTTATTGAAATTTCTAGAAATCTAGTTGCTTATTCTTGGGGATTGCCACTAGCTCTTGAAGTCCTCGGGTCCTATTTGTTTGGTATAGGGATATCAGAGTGGAAGAATGTATTGGAGAAACTTAAGAAAATTCCTAATGATGAAGTACAAGAGAAGTTGAAAATAAGCTATGATGGTTTAACTGATGATACCGAGAAAGGAATATTCCTTGATATAGCATGTTTCTTTATAGGAATGGATCGGAATGATGTTATACATATATTAAATGGGTGTGGACTTTGTGCAGAAAATGGAATACGTGTTCTAGTAGAGAGAAGCCTTGTAACTGTAGATGATAAGAACAAGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCATTCGTTCCAAATCACCAATGGAGCTTGAAGAGCGTAGCAGATTATGGTTTCACGAGGATGTGCTTGATGTATTATCAAAAGAAACTGGAACAAAAGTTATTGAGGGACTGACTTTGAAGTTGCCGAGAACTAATACAAAATGTTTGAGCACTAAAGCTTTTAAGGAGATGAAGAAACTAAGGTTGCTTCAACTTACTGCTGTACAACTGGTTGGAGATTTTAAGTATCTTTCCAAAGATCTTAGATGGCTTTGTTGGCATGGATTTCCTTTAACATGCATACCGGAAAACTTTTATCAAGGAAGTCTAGTTTCCATTGAGTTAGAAAATAGTAATATTAATCTTTTGTGGAAAGAGGCCCAGGTGATGGAGAATTTGAAAATTCTTAATCTTAGTCATTCTCATTATTTAACAAAGACTCCAGACTTTTCAAATTTGCCTAATCTTGAAAAATTATTACTTGTAGATTGTTCAAAGTTATCTAAGGTTTCTTATACCATTGGACATCTCAATAAAGTTATTCTAATAAATTTTCAAGATTGTATTAGCCTTCTTAACCTTCCAAGAAGTATTTATAAGTTGAAATCCCTTAAAACACTCAATCTTTCTGGATGTTTAAAGATTGACCAGTTAGAAGAAGACTTGGAACAAATGGAGTCTTTGACAACCCTTATTGCAGATAAGACCGCAATAACAAGGGTGCCTTTTTCTATAGTTAAATCAAAAAGAATTGGATATATTTCTTTGTGCGGCCATGAAGGATTCTCCCGTGATGTATTTCCTTCAATCATTTGGTCTTGGATGTCACCAACAAACAATCTCCCATCTCGTATTCAAAAATTTGCAATTATGTCATCTCTTGTTTCTGTAGATGTGCCAAATAGTAGTTCCAATCATCTATCATATATTTTTGAAGACCTTCCCGTGCTTGAAAGTCTTTGGGTGGAGTGTGGCTCAGAACTTCAACTTTCTCTAGATGCAGCAAATATTTTGGATGCTATATATGCCACAAATTCCGAAAAAGAAGTGGAATCAACTGCAGCTACATCACAACTGCACAATATGAATGTTTTTACATTAATTGAATGCAGCAAAGAAGTGCACAACTATTCAGAATCAAAAATATTCTTGAGATCGCTTTTAATTCAGATGGGAATGAGTTGTCCAGTCATCGATATTGTGAAACAGGAAATTTTACAGAATATGACTAGTGATGGTGGTGGTAGTTCGCTCCCCGGTGATAGTTATCCAGATTGGTTAACCTTTAACAGTGAAGGTTCTTCTGTGACTTTTGAAATTCCTCAAGTGAATGGGCGTAACTTGAAGAAAATGATGTGTCATGTGCATTATTCTTCCCCAAAAAATATAACATTAGATGGCTTAAAAAATTTGTTGGTGATTAATCATACAAAGGCCATCATTCAACTTTATAAAAGAAATGCATTAGCTTCCTTTGAGGACGAGGAGTGGCAGAGGGTACTATCAAAAATAGAGCCTGGAAACAAAGTGCAAATTGTTGTCGTTTTCTGGAGCAAATTAACTGTTAACAAGACAACAATTTATCTCATATATGAACCAATGGAAGAAAACATAGAGCATTACCGAGCACCAAATAAGAATGTACTTATTAGTAGGGATGAAAATGTATGTGTTGTTGGGTCAGTCACTCTTCAAGTAGAACCCATATATGAGCCAACAGATGAAACAATGGAGCATTGTCATGCATCTAATAAGAATCTAATTGTTTATACTAGCGAAGAAAATGTATCTGTTGTCAGGTCATTCTCTCCTCAAGTGGAATCCAAAGATGATATTAGTGAGCTCTGGTTGTTAAAGAATTGA 4212 0.3865 MSLSGSEFPFISSMSLSSSESDSNYYGMEIASSDGDDEMEMDFLRERYSEDNRNYDVFLSFRGEDTRHSFISHLYTALQNAGVFVFKDDETLPRGNQISASLRLAIEESRISVVVFSRSYAGSRWCLKELEKIMECHRTTGLMVLPVFYGVDPSEVRHQTGHFGKAFQNLENRILKVKDEKDLDWMQRWKKTLGEAAGISGLVVRNFCGEMDILDKIYILVKHWREALCELVGISRGAAGSYSRLQVKIADKIDLFVDHWRDGLCIATCIPWGGMLIAEKKIDLLVKHWKGALCEALCEVAVLNSSGQIEVVDKTNLLVKHWSGALREAVAISGGAFLNFTGELKIANEIDLLVKHWREALCEVAKNEISDGAVLNSSVEKEMARDFNTLGMYWGKALRDAACIWRLAVLNSRGEMKIVAEESNVFVKKRWMEEALREAASISGIVVLNSRNESEAIKSIVKNVTRLLDKTELFVADNPVGVESRVQEMIQLLDQKQSNDVLLLGIWGMGGVGKTTIAKALYNKIGRNFEGRSFLAHIREVWGQDGGQVCLQEQLLFDIEKETNTKIRNVESGKNILKERLRHKRILLILDDVNKLHQLNVLCGNRDWFGPGSRIIITTRDMHILRGKSIDKVFTMKGMDEDESIELFSWHAFKQASPREDFIEISRNLVAYSWGLPLALEVLGSYLFGIGISEWKNVLEKLKKIPNDEVQEKLKISYDGLTDDTEKGIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRSKSPMELEERSRLWFHEDVLDVLSKETGTKVIEGLTLKLPRTNTKCLSTKAFKEMKKLRLLQLTAVQLVGDFKYLSKDLRWLCWHGFPLTCIPENFYQGSLVSIELENSNINLLWKEAQVMENLKILNLSHSHYLTKTPDFSNLPNLEKLLLVDCSKLSKVSYTIGHLNKVILINFQDCISLLNLPRSIYKLKSLKTLNLSGCLKIDQLEEDLEQMESLTTLIADKTAITRVPFSIVKSKRIGYISLCGHEGFSRDVFPSIIWSWMSPTNNLPSRIQKFAIMSSLVSVDVPNSSSNHLSYIFEDLPVLESLWVECGSELQLSLDAANILDAIYATNSEKEVESTAATSQLHNMNVFTLIECSKEVHNYSESKIFLRSLLIQMGMSCPVIDIVKQEILQNMTSDGGGSSLPGDSYPDWLTFNSEGSSVTFEIPQVNGRNLKKMMCHVHYSSPKNITLDGLKNLLVINHTKAIIQLYKRNALASFEDEEWQRVLSKIEPGNKVQIVVVFWSKLTVNKTTIYLIYEPMEENIEHYRAPNKNVLISRDENVCVVGSVTLQVEPIYEPTDETMEHCHASNKNLIVYTSEENVSVVRSFSPQVESKDDISELWLLKN 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1199 1403 Coils Coil 998 1018 - -
Aed2g1199 1403 CDD AAA 480 621 - -
Aed2g1199 1403 SMART till_3 54 199 IPR000157 GO:0007165
Aed2g1199 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 733 IPR027417 -
Aed2g1199 1403 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 61 1312 IPR044974 GO:0006952
Aed2g1199 1403 Gene3D - 283 474 IPR035897 -
Aed2g1199 1403 Gene3D - 475 632 IPR027417 -
Aed2g1199 1403 Gene3D - 51 236 IPR035897 -
Aed2g1199 1403 PRINTS Disease resistance protein signature 503 518 - -
Aed2g1199 1403 PRINTS Disease resistance protein signature 673 687 - -
Aed2g1199 1403 PRINTS Disease resistance protein signature 580 594 - -
Aed2g1199 1403 PRINTS Disease resistance protein signature 982 998 - -
Aed2g1199 1403 Gene3D - 638 722 IPR042197 -
Aed2g1199 1403 ProSiteProfiles TIR domain profile. 53 197 IPR000157 GO:0007165
Aed2g1199 1403 Pfam NB-ARC domain 483 712 IPR002182 GO:0043531
Aed2g1199 1403 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 201 IPR035897 -
Aed2g1199 1403 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 61 1312 - -
Aed2g1199 1403 Pfam TIR domain 54 221 IPR000157 GO:0007165
Aed2g1199 1403 SMART AAA_5 500 640 IPR003593 -
Aed2g1199 1403 SUPERFAMILY "Winged helix" DNA-binding domain 708 815 IPR036390 -
Aed2g1199 1403 Gene3D Ribonuclease Inhibitor 829 1159 IPR032675 -
Aed2g1199 1403 SUPERFAMILY L domain-like 828 1114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1199 Aed-Chr2 10446725 10470704 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1199 429 1028 WRKY Transcription Factor Family AT4G12020 34.194 9.87e-79 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1199 - - gmx:100800776 2115.5