Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1190 ATGCCTTCCTCTTCCACCACCATAGTTTCGAAATGCGTCATCCACCCCGACCAGAAATCCAACATGAAACCTTTGAGACTCTCTGTTTCTGATCTTCCAATGTTGTCGTGCCACTATATTCAAAAGGGTGTGCTGCTGACAGCACCGCCCTCGTCTTTCGATGATCTGATATTCTCTTTTAAACAATCTCTTTCGATCGCGTTGTCACACTTTCCCGCTTTAGCCGGGAGATTCTCCACTGATTCGGATGGTTATATTGATATTGTCTGCAACGACGCCGGCGTGGATTTCATCCACGCCAAAGCGAAACACCTGACTCTAAGCGCCGTCGTTTCGCCGTCGCTCGTCGATGTCCACCCTTGCTTCAAGGAGGAGTTCTTCCCCTACGACATGACGATCTCCTACGCCGGCCACCACACACCCCTCGCCGCCGTGCAGATCACCGAGCTCGCCGACGGAGTGTTCGTCGGATGCACCGTGAACCACTCCGTCACCGACGGAACCTCGTTCTGGCACTTCTTCAACACGTTCGCCGCCGTCACCAAGGGCGGCGCCGCCAAGAAAATCCTCCGCGCGCCGGATTTTACCAGAGAAACCGTCTTCAACTCCGCCGTCGTCCTCCCCGTCCCCTCCGGAGGCCCCGCCGTGACGTTCGATCCCAACCAGCCTCTCCGGGAACGCGTCTTCCACTTCTCCCGCGAATCCATTCAGAAACTCAAACTACGAGCCAACAACAACAACAGCAGCACCGTCAACAATAACAACAACGAACTAACGGAAGTAATTGGAAAACAAGTAAATGACGGTTGGAAAATCGTTAACGGTAACGGAAACGTTAACGGAAAGACCAACGGTAACGGAAGAAACGAGATCTCTTCGTTTCAGTCGTTATCTGCTCAGCTATGGAGAGCGGTGACACGTGCGAGGAATTTCAACGACCCTGCCAAAACGTCGACGTTTCGGATGGCGGTGAATTGCCGCCACCGCCTAGAACCTAAGATGGACGCGTTCTACTTCGGCAATGCGATCCAGAGCATCCCGACCGTCGCGACGGTCGGGGACATCCTCTCGCGCGATCTCCGCTTCTGCGCCGCACTACTACACCGTAACGTCGTCGCACACGACGACACCACGGTGCGGCGCGGCATAGAAGACTGGGAGAGCGCGCCGAGGCTGTTTCCTCTCGGAAACTTCGACGGCGCGATGATCACCATGGGAAGCTCGCCGCGGTTTCCCATGTACGACAACGATTTCGGCTGGGGAAGACCTATTGCCATCCGCAGCGGAAAAGCGAACAAGTTCGACGGAAAAATCTCCGCTTTTCCGGGGAGAGAGGGAAACGGCAGCGTCGATTTGGAAGTCGTTTTGGCCCCGGCCACCATGGCGGGGCTCGAAAACGACATCGAGTTTATGCAATACGTAACGCATGTTGTGTGA 1437 0.5511 MPSSSTTIVSKCVIHPDQKSNMKPLRLSVSDLPMLSCHYIQKGVLLTAPPSSFDDLIFSFKQSLSIALSHFPALAGRFSTDSDGYIDIVCNDAGVDFIHAKAKHLTLSAVVSPSLVDVHPCFKEEFFPYDMTISYAGHHTPLAAVQITELADGVFVGCTVNHSVTDGTSFWHFFNTFAAVTKGGAAKKILRAPDFTRETVFNSAVVLPVPSGGPAVTFDPNQPLRERVFHFSRESIQKLKLRANNNNSSTVNNNNNELTEVIGKQVNDGWKIVNGNGNVNGKTNGNGRNEISSFQSLSAQLWRAVTRARNFNDPAKTSTFRMAVNCRHRLEPKMDAFYFGNAIQSIPTVATVGDILSRDLRFCAALLHRNVVAHDDTTVRRGIEDWESAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPIAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPATMAGLENDIEFMQYVTHVV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1190 478 Gene3D - 222 471 IPR023213 -
Aed2g1190 478 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 475 - -
Aed2g1190 478 Gene3D - 6 207 IPR023213 -
Aed2g1190 478 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 475 - -
Aed2g1190 478 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
Aed2g1190 478 Pfam Transferase family 6 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1190 Aed-Chr2 10198489 10199925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1190 60 466 Monolignol Biosynthesis Gene Families AT5G48930 27.644 8.20e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1190 - - gmx:100804321 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2136 3 25145348 25146817 Aed2g1190 2 10198489 10199925 ECH
Aed2g1190 2 10198489 10199925 Aed2g1190 2 10198489 10199925 ECH