Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1185 ATGGAGGGGAAGGAAGAGGACGTGAGAGTTGGAGCCAACAGGTACGGCGAGAGGCAGCCGATAGGAACCGCGGCTCAGGCGAAAGACTACAGCGAGCCGCCCTCGGCACCTCTCTTCGAGTCGGGCGAGTTGTCATCGTGGTCCTTCTATAGGGCTGGCATAGCGGAGTTTGTGGCGACTTTCTTGTTCCTTTACATAACGGTGCTCACTGTGATGGGTGTGGCCAAATCCAAAACCAAGTGCTCCACTGTGGGCATTCAAGGCATTGCTTGGGCTTTTGGGGGAATGATCTTTGCTCTTGTTTATTCCACTGCTGGCATCTCAGGGGGTCACATTAACCCAGCAGTGACATTTGGGCTGTTCTTGGCACGAAAGCTCTCTCTGACAAGGGCAATTTTCTACATAATCATGCAGTGCTTGGGTGCAATCTGTGGTGCAGGTGTTGTTAAAGGGTTCCAGCCACAACTCTATGAGAGGCTTGGTGGTGGTGCCAACACAATAGCTAAAGGCTACACCAACGGTGCTGGCCTTGGGGCAGAGATTATTGGCACATTTGTGCTTGTTTACACTGTCTTCTCTGCCACTGATGCCAAAAGAAATGCCAGAGACTCCCATGTTCCAATTTTGGCACCACTTCCAATTGGTTTTGCTGTGTTTCTAGTGCACTTGGCTACAATTCCTGTAACAGGGACTGGTATAAACCCTGCTAGAAGTCTAGGTGCTGCTATTATCTACAACAATGAACAAGCTTGGAATGACCATTGGATCTTTTGGGTAGGGCCTTTCACTGGGGCAATGCTTGCAGCTTTGTACCATCAAGTAGTGATCAGAGCCATCCCCTTCTCCTCAAAGTGA 855 0.5006 MEGKEEDVRVGANRYGERQPIGTAAQAKDYSEPPSAPLFESGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVAKSKTKCSTVGIQGIAWAFGGMIFALVYSTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQPQLYERLGGGANTIAKGYTNGAGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAAIIYNNEQAWNDHWIFWVGPFTGAMLAALYHQVVIRAIPFSSK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1185 284 SUPERFAMILY Aquaporin-like 44 277 IPR023271 -
Aed2g1185 284 CDD MIP 51 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 PRINTS Major intrinsic protein family signature 93 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 PRINTS Major intrinsic protein family signature 255 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 TIGRFAM MIP: MIP family channel proteins 55 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 ProSitePatterns MIP family signature. 111 119 IPR022357 -
Aed2g1185 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 284 IPR034294 -
Aed2g1185 284 Pfam Major intrinsic protein 43 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1185 284 Gene3D Glycerol uptake facilitator protein. 36 281 IPR023271 -
Aed2g1185 284 PANTHER AQUAPORIN PIP1-2-RELATED 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1185 Aed-Chr2 10128649 10132494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1185 1 284 Major Intrinsic Protein MIP AT3G61430 84.912 5.04e-175 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1185 K09872 - gmx:100803259 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1185 2 10128649 10132494 Aed2g1185 2 10128649 10132494 ECH
Aed9g1980 9 23130288 23132145 Aed2g1185 2 10128649 10132494 PCT