Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1158 ATGCACCTGCTGCTGATGCAACCATCATCAGTCTCTGGGCCCTCATCATCTTCTAATCCAGCCCAAGTTCCATCTGCACCATTGCAGGCAGGTCCATGTAAGTTATGGTGTGAAATTTGTAAGGCTGAGTGCAATACTCCAGAAATGTTGGAGCAGCATAAGAATGGAAAGCGGCATAGGAAGAACTTGCTTGTGCATGAAGAAGTACAGAGACTCAAAGTTCTAAATGGACAACAGGGTGGAAACATTTCTACTTCTGAAACGAATTTAACAATCCAACCTGAGAACGTTCAGGAATCTGAGAAAAAAGGATTACCAGAAGAAAATATGAGTTCTGAAGCTACAACTGATAATCACAATGATGAAACTAAGCTACAGAATAATGTAGAAGGGGTGTCTGAAGTTCAAACTAAAGTGCCTCAGGAGGAACCTAGAGGCAACTCTGCCATACAGGGTCAGGGATTGAAGTGTAAGATGAGAGGATACGGAGGAGGTAAATACATGAGGAGTGGTGATGGGTCAAGAAAATCAGTGGAACCTCCAAAGCCTAAGCATTTCATATGTGAGTTGTGCAATGTTAAATGTGATTCCTAG 594 0.4242 MHLLLMQPSSVSGPSSSSNPAQVPSAPLQAGPCKLWCEICKAECNTPEMLEQHKNGKRHRKNLLVHEEVQRLKVLNGQQGGNISTSETNLTIQPENVQESEKKGLPEENMSSEATTDNHNDETKLQNNVEGVSEVQTKVPQEEPRGNSAIQGQGLKCKMRGYGGGKYMRSGDGSRKSVEPPKPKHFICELCNVKCDS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1158 197 PANTHER OS06G0651300 PROTEIN-RELATED 8 197 - -
Aed2g1158 197 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 8 197 - -
Aed2g1158 197 MobiDBLite consensus disorder prediction 8 25 - -
Aed2g1158 197 MobiDBLite consensus disorder prediction 100 121 - -
Aed2g1158 197 MobiDBLite consensus disorder prediction 1 27 - -
Aed2g1158 197 Gene3D Classic Zinc Finger 19 66 - -
Aed2g1158 197 MobiDBLite consensus disorder prediction 136 182 - -
Aed2g1158 197 MobiDBLite consensus disorder prediction 95 121 - -
Aed2g1158 197 Pfam Zinc-finger of C2H2 type 36 59 - -
Aed2g1158 197 SUPERFAMILY beta-beta-alpha zinc fingers 34 63 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1158 Aed-Chr2 9606837 9613071 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed2g1158 zf-met 9.2e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1158 - - gmx:102666037 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1497 9 17849837 17856394 Aed2g1158 2 9606837 9613071 PCT