Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1154 ATGGCCACCGCAGCAGCCACCTCCTCCTTCATGGGGGCGCGCCTCCTCGAGGCCCATTCCGGATCGGGCCGGGTGCAGGCCAGGTTCGGATTCGGCAAGAAAAAGGCCGCCCCCAAGAAGCCTTCCAGGGGATCGGGTCCGGTTTCCGACAGACCGCTGTGGTACCCGGGCGCTAAGGCGCCCGAGTACCTCGACGGCAGCCTCGTCGGAGACTACGGGTTCGACCCCTTCGGACTCGGGAAGCCAGCAGAGTACCTGCAGTACGAGCTGGATTCGCTGGACCAGAACCTGGCGAAGAACCTCGCCGGGGACATTATTGGAACCAGGACCGAGTTCTCGGACGTGAAGTCCACGCCGTTCCAGCCCTACACGGAGGTTTTCGGGCTCCAGAGGTTCCGCGAGTGCGAGCTCATTCACGGAAGGTGGGCCATGCTCGCCACCCTCGGCGCCATCACTGTTGAGTGGCTCACCGGTATCACGTGGCAAGACGCCGGAAAGGTTGAGCTAGTGGAAGGTTCGTCATACCTAGGGCAACCACTTCCATTCTCAGTGACCACATTGATCTGGATCGAGGTTCTCCTAATTGGGTACATAGAGTTCCAGAGGAACGCAGAGCTTGACCCAGAAAAGAGGCTTTACCCAGGTGGCAGTTACTTCGACCCACTGGGCCTGGCCTCAGACCCAGAGAAGAAAGCTACACTTCAATTGGCGGAGATCAAGCACGCCCGTCTCGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCCGCCGCCACCGGCAAGGGCCCGCTCAACAACTGGGTCACCCACTTGAGTGACCCACTCCACACAACCATCATTGACACCTTCTCATCATCCTCTTAA 864 0.5995 MATAAATSSFMGARLLEAHSGSGRVQARFGFGKKKAAPKKPSRGSGPVSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQYELDSLDQNLAKNLAGDIIGTRTEFSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGITWQDAGKVELVEGSSYLGQPLPFSVTTLIWIEVLLIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWVTHLSDPLHTTIIDTFSSSS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1154 287 MobiDBLite consensus disorder prediction 30 53 - -
Aed2g1154 287 SUPERFAMILY Chlorophyll a-b binding protein 45 284 - -
Aed2g1154 287 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 2 286 - -
Aed2g1154 287 Gene3D Chlorophyll a/b binding protein domain 54 287 - -
Aed2g1154 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 286 IPR001344 GO:0009765|GO:0016020
Aed2g1154 287 Pfam Chlorophyll A-B binding protein 60 256 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1154 Aed-Chr2 9588303 9591249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1154 10 286 Chloroplast and Mitochondria Gene Families AT3G08940 84.173 7.42e-175 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1154 K08915 - gmx:100785180 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1154 2 9588303 9591249 Aed2g1154 2 9588303 9591249 ECH