Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1148 AGCAATTTTATTTATTATCATCGTGATGAAGCTGCTGTGGCATATGGTCCTGGAGAGGCCTTAGTGGTGGAACGTGTTAATGTTCATCCTCCTCAGAAAATGGAGGTTCGAATCAAAATCCTCTTCACTTCAATCTGCCACACCGATCTCAGTGCTTGGCATGGCGAGAATGAGGCTCAACGTGCTTATCCTCGGATTTTCGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTGGGTGAAGGTGTGAGTGACATGAAAGAAGGGGACTTAGTAGTGCCAATTTTCAACGGAGAATGTGGGGATTGCAAATATTGCAAGTGCGAGAAGACTAACAAGTGTGAGAACTTTGGTGTGGATCCAATGAAGAAAGTGATGGCTAGTGATGGTGCCACAAGGTTTTCCACAATTGATGGAAAACCCATCTTCCATTTCATGAACACTTCAACTTTCACTGAGTACACGGTGGTGGATTCAGCATGCGTCGTTAAGATTCACATTCATGGCGATGGAGACCTCAATCCCTACATCAAAAGGCTAACCTTACTAAGTTGTGGCGTATCTACGGGTGTTGGGGCTGCTTGGAACACTGCTAATGTGCATTCTGGTTCAACTGTAGCTGTCTTTGGTTTAGGTGCCGTGGGTCTCTCTAGGATTAGGGAAATGACTGGTGGGGGTGTGCACTATAGTTTTGAATGTGCTGGAAATTTAAACGTTCTAAGGGATGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACAGTGATATTAGGAATTCATCCATCACCAAAATTGCTTCCCATCCACCCAATGGAGCTCTTCGAGGGTCGCAGAATAGTAGGATCAGTTTTTGGAGGCTTCAAAGGGAAGACTCAATTGCCACATTTTGCCAAAGAATGCATGGATGGAGTAAGGACTATACCCTTCTCTGAAAATTTTCATTTGTTTTTTTAG 951 0.4479 SNFIYYHRDEAAVAYGPGEALVVERVNVHPPQKMEVRIKILFTSICHTDLSAWHGENEAQRAYPRIFGHEASGIVESVGEGVSDMKEGDLVVPIFNGECGDCKYCKCEKTNKCENFGVDPMKKVMASDGATRFSTIDGKPIFHFMNTSTFTEYTVVDSACVVKIHIHGDGDLNPYIKRLTLLSCGVSTGVGAAWNTANVHSGSTVAVFGLGAVGLSRIREMTGGGVHYSFECAGNLNVLRDAFLSAHEGWGLTVILGIHPSPKLLPIHPMELFEGRRIVGSVFGGFKGKTQLPHFAKECMDGVRTIPFSENFHLFF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1148 316 Gene3D - 12 188 - -
Aed2g1148 316 Gene3D - 218 281 - -
Aed2g1148 316 Gene3D - 282 302 - -
Aed2g1148 316 Gene3D - 189 217 - -
Aed2g1148 316 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Aed2g1148 316 PANTHER ALCOHOL DEHYDROGENASE 217 308 - -
Aed2g1148 316 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 180 302 IPR036291 -
Aed2g1148 316 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 10 216 - -
Aed2g1148 316 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 217 308 - -
Aed2g1148 316 Pfam Alcohol dehydrogenase GroES-like domain 35 163 IPR013154 -
Aed2g1148 316 PANTHER ALCOHOL DEHYDROGENASE 10 216 - -
Aed2g1148 316 SUPERFAMILY GroES-like 10 208 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1148 Aed-Chr2 9547062 9553391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1148 35 295 Monolignol Biosynthesis Gene Families AT2G21890 27.815 3.54e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1148 K00001 - gmx:100787307 552.362