Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1143 ATGGGTTCCCATCGAAACCATGATGAGGAGGAATCATCAATGAAGGGGTTGTTGTTGAGCAAGGAAATGAGACATGGAAGAACTGCATATAACATGTCTTCTTCTTCGTTGCGCAAGAAATCAGACCTAACTCTCGTGTCTAAGGTTCGTTATGGTTCACTCAGAAACGTGTTGGCGAATTTGCAAGAGGTTGTTCTTGGAACCAAGCTCTCTATTCTTTTCCCTGCCGTTGTGCTTGCAATTGTTCCTTGGATTTTTGCGTTGAGCTTACTTGGACTTACCCCACTTGCCGAACGAGTCAGTTTCTTGACAGAACAGGTTGCGTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACCTGTGGGAATGCAACAGAGCTCATCGTAGCAATTTTTGCCCTTAGCAATAACAAAATTGATGTGGTCAAGTATTCTCTGCTGGGATCCGTCATTTCTAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCTGTGGTGGCATTGCAAACCTTAGAAAGCAGCAAAAATATGATAGATTGTCAAGAGCTTCTAGCATTGTTATGGTGATTGCATATTGTTCTTACCTTGTCTTCCAATTATGGACTCACCGGCAGCTATTTGAAGCCCAAAATGAAGATGATGAAGAGGGTGGCAATGATACAGAAGAAGCAGTGATAGGATTGTGGAGTGCTTTTGCTTGGCTGGTTGGAATGACTGTGATCGTTGCTGTACTATCTGAATATGTGGTGGAAACAATTGAGGATGCATCAGATTCATGGGGTTTATCTGTAAGCTTCCTCAGCATAATCTTGCTACCAATATTTGGCAATGCAGCTGAACATGCAGGAGCAGTCATATTTGCTTTCAAGAACAAACTGGACATCTCCTTGGGTGTTTCCTTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTGTGTGTGATTGTTGCTTGGATTCTTGGAATCGAAATGGATCTCAACTTCAACCTCATAGAGACAGGTTCTCTTGCTTTGGCAATAATAATCACAGCCTTCACATTACAGGACGGAACTTCTCACTACATGAAAGGGCTTGTTCTCATACTCTGCTACATTGTTATTGCAGCATGCTTTTTCGTACAAAGAACACCCTCTAACCAAACTAATGTTCCTAATACAACGCTTACACCAGCAACTGAAAACAACATGTTGGCCGATTTTGGTTTCTCTGAGATAAAGGGGTGCAACATCGAAGAATAG 1248 0.4255 MGSHRNHDEEESSMKGLLLSKEMRHGRTAYNMSSSSLRKKSDLTLVSKVRYGSLRNVLANLQEVVLGTKLSILFPAVVLAIVPWIFALSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNATELIVAIFALSNNKIDVVKYSLLGSVISNLLLVLGTSLFCGGIANLRKQQKYDRLSRASSIVMVIAYCSYLVFQLWTHRQLFEAQNEDDEEGGNDTEEAVIGLWSAFAWLVGMTVIVAVLSEYVVETIEDASDSWGLSVSFLSIILLPIFGNAAEHAGAVIFAFKNKLDISLGVSLGSATQISMFVVPLCVIVAWILGIEMDLNFNLIETGSLALAIIITAFTLQDGTSHYMKGLVLILCYIVIAACFFVQRTPSNQTNVPNTTLTPATENNMLADFGFSEIKGCNIEE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1143 415 Gene3D - 113 376 IPR044880 -
Aed2g1143 415 Pfam Sodium/calcium exchanger protein 232 373 IPR004837 GO:0016021|GO:0055085
Aed2g1143 415 Pfam Sodium/calcium exchanger protein 83 198 IPR004837 GO:0016021|GO:0055085
Aed2g1143 415 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 18 180 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aed2g1143 415 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 18 180 - -
Aed2g1143 415 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 181 388 - -
Aed2g1143 415 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 181 388 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1143 Aed-Chr2 9471701 9476435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1143 20 383 Antiporters AT2G38170 65.783 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1143 K07300 - gmx:100797538 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1143 2 9471701 9476435 Aed2g1143 2 9471701 9476435 ECH
Aed9g2006 9 23351558 23355832 Aed2g1143 2 9471701 9476435 PCT