Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1142 ATGGCTTCTCGAAACAATGAGTTGGTGGAAAATGGTGTGAAGGGGTTGTTGAGCAAGGAAATGAGACATGGAAGAACTGCACATAACATGTCATCATCTTCTTTGCGCAAGAAATCAGACCTAACTCTTGTGTCTAAGGTTCGTTATGGTTCACTCAGAAACGTGTTGGCGAATTTGCAAGAGGTTATTCTGGGAACCAAGCTCTCTTCTTGGGTCTTTTTGTTGAGTTTACTTGGGCTTACCCCCCTAGCTGAACGAGTCAGCTTCTTGACAGAACAAGTTGCTTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTAAGCTATAACAAAATTGCTTTGGTCAAATATACTCTGCTGGGTTCCATAATTTCGAACCTTCTTCTGGTTCTTGGATCCTCTCTATTCATTGGTGGCATTGCAAACCTTAGACAAGAACAAAAATACGATAGAAGACAGGCAGATATGAATTTGCTTATGCTGTTTGTGGCATTGCTGTGCCACTTGTTGCCAATGCTGTTCTATTATGATGGTGCCTCAACAGAATCAACTCTGCAGTTGTCAAGAGCTTCTAGCATTGTTATGGAAGATGATGAAGAGGGTGGCAATGATTCAGAAAAAGCAGTGATAGGATTCTGGAGTGCTTTTGCTTGGCTGGTTGGGATGACTGTGATCATTGCTGTGCTGTCTGAATATGTGGTGGAAACAATTGAGGATGCATCAGATTCATGGGGTCTGTCTGTTAGATTCCTCTGCATAATCTTGCTTCCAATAGTTGGCAATGCAACTGAACATGCAGGAGCAATCATATTTGGTTTCAAGAACAAACTGGTACCAACTTTAATTGCTAGTTAA 903 0.4197 MASRNNELVENGVKGLLSKEMRHGRTAHNMSSSSLRKKSDLTLVSKVRYGSLRNVLANLQEVILGTKLSSWVFLLSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNATELIIAIFALSYNKIALVKYTLLGSIISNLLLVLGSSLFIGGIANLRQEQKYDRRQADMNLLMLFVALLCHLLPMLFYYDGASTESTLQLSRASSIVMEDDEEGGNDSEKAVIGFWSAFAWLVGMTVIIAVLSEYVVETIEDASDSWGLSVRFLCIILLPIVGNATEHAGAIIFGFKNKLVPTLIAS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1142 300 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 213 297 - -
Aed2g1142 300 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 6 69 - -
Aed2g1142 300 Pfam Sodium/calcium exchanger protein 70 211 IPR004837 GO:0016021|GO:0055085
Aed2g1142 300 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 70 211 - -
Aed2g1142 300 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 70 211 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aed2g1142 300 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 69 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aed2g1142 300 Gene3D - 100 296 IPR044880 -
Aed2g1142 300 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 213 297 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1142 Aed-Chr2 9455723 9461120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1142 18 293 Antiporters AT3G51860 61.890 1.10e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1142 K07300 - gmx:100782052 446.047