Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1135 ATGGGTGTGGACTACTACAAACTTCTTCAGGTGGATCGAAATGCCAGCGATGATGATCTCAAGAAAGCCTATCGGAAGCTTGCTATGAAGTGGCACCCTGATAAGAACCCTAACAACAAAAGGGACGCTGAGGCCAAATTCAAGCAAATCTCAGAAGCTTATGATGTTTTGAGTGATCAGCAAAAGAGGGCAGTGTATGATCAGTATGGTGAGGAGGGATTGAAAGGGCAGGTGCCACCCCCAGGTGCAGGTGGATTTTCCAGTGGGTGCGGTGATGGCAGACCAACAATGTTTCGGTTCAACCCGAGAAGTGCAGATGATATATTCTCGGAGTTTTTTGGGTTTACAAGTCCCTTTGGGGGAATGGGGGATATGGGTGGCCGTGCTGGCCCATCTGGCTATCCCAGATTTGCAGATGACCTTTTTGCTTCTCTTAGTAAGGGTGGGGCTGGAGAAGGCGCTGGCAATGTGCCAAGGAAAAGTGCGCCGATTGAGAGAACATTGCATTGCAGTTTAGAGGATTTATACAAAGGGACTACCAAAAAAATGAAGATTTCCAGGGATGTGATTGATGCCAGTGGGAGGCCCACCACTGTAGAGGAAATTCTAACCATTGAGATCAAGCCAGGCTGGAAAAAAGGAACAAAGATAACTTTTCCAGAGAAGGGAAATGAACAAAGAGGAGTTATACCAGCTGATCTTGTTTTTATCATTGATGAGAAACCTCATGGAGTCTTCAAAAGGGATGGCAATGATATAGTCGTCACACAGAAGATATCTCTCGTTGAAGCTCTGACCGGTTACACAGCACAGCTGACGACACTTGACGGGAGGAATCTTACTGTCTCCACCAACTCCATCATTAGTCCGACGTACGAAGAAGTTATTAAAGGCGAGGGTATGCCGATTCCCAAGGAACCTTCCAAAAGGGGAAACTTGAGGGTCAAGTTCAACATCAAGTTCCCCTCTAGACTCACATCAGAGCAGAAAACCGGCATTAAACGATTATTGACATAA 1017 0.4621 MGVDYYKLLQVDRNASDDDLKKAYRKLAMKWHPDKNPNNKRDAEAKFKQISEAYDVLSDQQKRAVYDQYGEEGLKGQVPPPGAGGFSSGCGDGRPTMFRFNPRSADDIFSEFFGFTSPFGGMGDMGGRAGPSGYPRFADDLFASLSKGGAGEGAGNVPRKSAPIERTLHCSLEDLYKGTTKKMKISRDVIDASGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHGVFKRDGNDIVVTQKISLVEALTGYTAQLTTLDGRNLTVSTNSIISPTYEEVIKGEGMPIPKEPSKRGNLRVKFNIKFPSRLTSEQKTGIKRLLT 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1135 338 Gene3D - 243 323 - -
Aed2g1135 338 CDD DnaJ_C 162 325 - -
Aed2g1135 338 Gene3D DnaJ domain 3 123 IPR036869 -
Aed2g1135 338 Gene3D - 163 241 - -
Aed2g1135 338 CDD DnaJ 4 59 IPR001623 -
Aed2g1135 338 SUPERFAMILY Chaperone J-domain 3 100 IPR036869 -
Aed2g1135 338 Coils Coil 40 60 - -
Aed2g1135 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Aed2g1135 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aed2g1135 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aed2g1135 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aed2g1135 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aed2g1135 338 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Aed2g1135 338 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 337 - -
Aed2g1135 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 243 IPR008971 GO:0006457|GO:0051082
Aed2g1135 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aed2g1135 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aed2g1135 338 Pfam DnaJ domain 4 67 IPR001623 -
Aed2g1135 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 331 IPR008971 GO:0006457|GO:0051082
Aed2g1135 338 SMART dnaj_3 3 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1135 Aed-Chr2 9390595 9395444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1135 4 67 Miscellaneous Gene Families AT5G49580 48.485 2.53e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1135 K09510 - gmx:100777607 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1135 2 9390595 9395444 Aed2g1135 2 9390595 9395444 ECH
Aed9g2015 9 23421842 23427123 Aed2g1135 2 9390595 9395444 PCT