Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1124 ATGGAGGGTACTCATCATAATCATCATCTCCATCATCACCACCAACAAAGGGTTCTTCAGAATATGATGAGTAGTAGTAGTGTGAACGTGGATATGAGTGATAATAGGTTTCCCCAATGGAGCATCCAAGAGACTAAGGAGTTTCTGGGGATCCGTGCAGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGCTCTGGGAAGTGATTTCCAACCGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATTTGAAACAATGGAGCAAGAAGCGACGAGGCAGCAATTCCCATTTTACAATGAGTTCAATGCGATCTTCACGGCAAGGATGCAGAGAATGTTGTGGGCTGAAGCCGAGGGTGGCTCAAAGAAGAACAAGGCTGCGACGCCTCACTCCTCGGACGAAGAAGAAGATAATGGCAATGAAGAGAGCACCGAAGCCGGTAGCAGCCGAAAGAAGAAGAAGGCAAAGCTAGTTAGTGGCGGTGGTAATAGTAATGATGGTAGTGGTAACAGTTTGAAGGAGATTTTGGAGGAGTTCATGAGGCAACAAATGCAAATAGAAGCACAATGGATGGAGGCGTTCGAGGCGAGGGAGAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAAGTGTTGGAGAATGAGAGGATAATGATGGAGGAAAGATGGAGAGAGAGGGAGGAGCAAAGAAGGATTAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCTCTAGTCACAGCCTTGCTAAACAAGCTAGAAAGACAAGGAATGTAG 840 0.4679 MEGTHHNHHLHHHHQQRVLQNMMSSSSVNVDMSDNRFPQWSIQETKEFLGIRAELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKAATPHSSDEEEDNGNEESTEAGSSRKKKKAKLVSGGGNSNDGSGNSLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALVTALLNKLERQGM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1124 279 Gene3D - 40 101 - -
Aed2g1124 279 PANTHER - 1 279 - -
Aed2g1124 279 MobiDBLite consensus disorder prediction 138 190 - -
Aed2g1124 279 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 279 - -
Aed2g1124 279 ProSiteProfiles Myb-like domain profile. 40 96 IPR001005 -
Aed2g1124 279 CDD GT1 38 101 - -
Aed2g1124 279 Coils Coil 274 279 - -
Aed2g1124 279 Pfam Myb/SANT-like DNA-binding domain 39 123 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1124 Aed-Chr2 9229685 9231806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1124 11 278 Trihelix Transcription Factor Family AT2G38250 57.455 6.05e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed2g1124 Myb_DNA-bind_4 2.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1124 - - gmx:100818384 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1124 2 9229685 9231806 Aed2g1124 2 9229685 9231806 ECH