Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1100 ATGGACACAATGGACGTAGACGAGGCTTCTGCACACAAAGAGGGAAAGCCCGTTTTGGCGATCTTGGTGGGAGCACCGGGGAGTGGGAAGTCCACATTCTGCGAAGAAGTGATAGGTGCCTCTACTCGCTCTTGGGTTCGCGTTTGCCAGGACACTATTGGAAATGGTAAAGCAGGAAATAAAGCTCAGTGCCTAAGCAGTGCAACTAGAGCATTGAAGGATGGGAAGAGTGTATTTATTGATAGGTGCAATCTTGACAGAGAACAGCGTTCAGAATTTGTAAAGCTTGGTGGTGGACCCAAAATAGATGTCCATGCAGTTGTGCTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCAGTCAAACGAACTGGGCATGAAGGAAAATTGCAGGGTGGGAAAGCTGCTGCAGTTGTGAATAGGATGCTTCAAAAAAAAGAGCTTCCCAAATTAAGTGAAGGCTATAACCGGATAACATTTTGTCAGAATGAGAGTGATGTCAAAAATGCTCTTAATACATACAGCACACTTGAGCCATTGGATAGTCTTCCACATGGCTCATTTGGCCAGAAGAATCCAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTTAAAAAAGCAGAGGTCCCAGTTGCTGCTACATCTAGAGAGAGTGGCATTGAAGACCCTACATCCCAGACTCCGGGGGGAAATAATTCCTGCTGCAAAGATAAGGAAACACTCTCCCCAGTTCCAGATAATGCCAACTCAGAGACAAAGGAAGTAGAAGGCCAAGCAGTTGGCTCTGCTGGTTCCCATGCCAATCATGTTTCTCTGGATGATATTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTCAACCATGAGAAGGCAGCTGATGTTATTGTTGAGAAGGTTGCAGAGTTCTCAAATAAGTTTAGGAATGCCAGACTTGTTCTCGTTGACTTGTCTCATAATTCAAAGATTCTGTCCTTAGTTAAGGCTAAAGTTGCAGGAACAAACATTGATACCCAAAAGTTCTTTACTCATGTTGGGGACATTACTCATCTTTATTCAAGGGGAGGTCTGTGCTGTAATGTCATTGCTAACGCTGCCAACTGGCGGTTAAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAACGCTGCAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTACAATCTCTTTCTCCTGGGAATGCTGCTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAACATGAACCCAAAGAGATCAAATTGTCTAAATAATGATTATAATAAAGGCGTCAAAATTCTCCAAAATGCTTATACTTCACTTTTTGAAGGTTTTGCATCTATTGTGAGGAACCAGACAGGGAAACCAGTAGGAAAAAGTGAAAACCTTGAAAGGAAGTCTTTAGAGTTGCAGGTTCAGTCTTATTGTTCCAGAAATCATTTCACAAAAACTGATCAAAAGAGTAAGAGAGATGCCGATCATGGTTTGGAAAAAAGCAAGAAATTCAAGGTGACTCAGGATGGCTCTGGATTGACCTTTACTGATTCTAAGGATGAAAATGCCAATTCAGAGCATAGAAGAACTGAGAGGAGCATGAGTAAGGCATGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCAGAAAAGCATAAGGGTGACTTGCTTGAAATTTCCGAAGATGTCATTGTATTGAACGATATGTATCCCAAGGCACGGAAGCATGTTCTTGTGTTGGCACAAACTGGGGGTCTTGACTGCCTGGCAGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGATGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGAACGAGGATGCTTCTCTGGTATTTCGTCTTGGATATCACTCGGCACCATCAATGCGGCAACTACATTTACATGTCATTAGCCAGGACTTTGAATCAACACATCTAAAGAACAAGAAGCACTGGAACTCATTTAACACTGCTTTCTTTCGTGACTCGGTAGATGTAATGGATGAGATCTCCAGTGATGGGAAGGCAACATTGAATGATGATGACAAGCTACTGTCAATGGAGTTGAGGTGCCACAGATGTAGGAGTGCACATCCAAACATACCACGGTTAAAATCACATATTAGCAGCTGCCAATCACCCTTCATGGCTCATCTGCTTCACAACGGACGCTTGGTGCGTGCACCAGGGGAACCTCGCAACAATGTCCAGTAG 2295 0.4327 MDTMDVDEASAHKEGKPVLAILVGAPGSGKSTFCEEVIGASTRSWVRVCQDTIGNGKAGNKAQCLSSATRALKDGKSVFIDRCNLDREQRSEFVKLGGGPKIDVHAVVLDLPAKLCISRSVKRTGHEGKLQGGKAAAVVNRMLQKKELPKLSEGYNRITFCQNESDVKNALNTYSTLEPLDSLPHGSFGQKNPDSKIQVGIMKFLKKAEVPVAATSRESGIEDPTSQTPGGNNSCCKDKETLSPVPDNANSETKEVEGQAVGSAGSHANHVSLDDIPTLAFPSISTSDFQFNHEKAADVIVEKVAEFSNKFRNARLVLVDLSHNSKILSLVKAKVAGTNIDTQKFFTHVGDITHLYSRGGLCCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVQSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPKRSNCLNNDYNKGVKILQNAYTSLFEGFASIVRNQTGKPVGKSENLERKSLELQVQSYCSRNHFTKTDQKSKRDADHGLEKSKKFKVTQDGSGLTFTDSKDENANSEHRRTERSMSKAWGSWAQALHQIAMHPEKHKGDLLEISEDVIVLNDMYPKARKHVLVLAQTGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNEDASLVFRLGYHSAPSMRQLHLHVISQDFESTHLKNKKHWNSFNTAFFRDSVDVMDEISSDGKATLNDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQSPFMAHLLHNGRLVRAPGEPRNNVQ 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1100 764 MobiDBLite consensus disorder prediction 529 554 - -
Aed2g1100 764 MobiDBLite consensus disorder prediction 503 522 - -
Aed2g1100 764 SMART YBR022w_8 344 486 IPR002589 -
Aed2g1100 764 Gene3D Leucine Aminopeptidase, subunit E, domain 1 227 325 IPR043472 -
Aed2g1100 764 PANTHER APRATAXIN 16 757 IPR026963 GO:0003677|GO:0006281|GO:0033699
Aed2g1100 764 Gene3D Leucine Aminopeptidase, subunit E, domain 1 326 471 IPR043472 -
Aed2g1100 764 SUPERFAMILY Macro domain-like 275 320 IPR043472 -
Aed2g1100 764 PANTHER APRATAXIN-RELATED 16 757 - -
Aed2g1100 764 MobiDBLite consensus disorder prediction 215 266 - -
Aed2g1100 764 Pfam Scavenger mRNA decapping enzyme C-term binding 568 678 - -
Aed2g1100 764 Gene3D - 560 741 IPR036265 -
Aed2g1100 764 MobiDBLite consensus disorder prediction 504 522 - -
Aed2g1100 764 ProSiteProfiles Macro domain profile. 332 511 IPR002589 -
Aed2g1100 764 Pfam Macro domain 367 443 IPR002589 -
Aed2g1100 764 Pfam AAA domain 19 145 - -
Aed2g1100 764 MobiDBLite consensus disorder prediction 219 257 - -
Aed2g1100 764 Pfam C2HE / C2H2 / C2HC zinc-binding finger 683 736 IPR032566 -
Aed2g1100 764 ProSitePatterns HIT domain signature. 647 665 IPR019808 -
Aed2g1100 764 SUPERFAMILY Macro domain-like 328 465 IPR043472 -
Aed2g1100 764 MobiDBLite consensus disorder prediction 540 554 - -
Aed2g1100 764 Gene3D - 2 176 IPR027417 -
Aed2g1100 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 160 IPR027417 -
Aed2g1100 764 SUPERFAMILY HIT-like 552 722 IPR036265 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1100 14 753 C2H2 Transcription Factor Family AT5G01310 58.108 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1100 K10863 - gmx:100786762 1380.54