Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1089 ATGATTTCCAGAGGGCCTTCAAATAGTTGTCCATTTTTGTTGAAACCGGACATCACTGCTCCTGGTACATCAATCTTAGCTGCATGGCCTTCAGATATTCCAGTGGCATTGTTGGGGTCCGAAAACCTTCTAAGTAACGTCAACATTTTAACCGGAACATCCATGGCATGCCCTCACGTGGCAGGTGTGGCTGCACTGTTAAAAGGAGTACACCCAGATTGGAGCCCTGCAGCAATTAGGTCAGCCATTATGACAACATCGGATAATTCGACAACACTAAGGAACCCATCAAAGACTGATTACAAACCAGCCTCTCCTTTAGCCTTGGGAGTTGGTCATGTAAATCCCAACAAAGCCCTTGACCCTGGACTTGTGTACGATGTGGGAGTTCAAGATTATGTCAATCTTCTCTGTGCATTGAACTTCACTCAAAAGAATATCATGATCATCACCAGATCATCTTTCAATAATTGCTCCAAGCCTTCCTTGGATCTCAACTACCCTTCTTTCATTGCTTTTTTCAATGGCAACGATTCTTCTAAAGAGTCAAGGGTATCTTGGGAATTTCAGAGAACGATGACGAATGTTGGGGATGGACAAACAATCTATACTACTAGCGTTACATTCATAAAAGGGTTTAGTGTTAGTGTTGTCCCAAACAAGTTGGTGTTCAAGGAGAAGAACGAGAAGCTAAGTTACAACTTAAGAATAGAAGGTCCGAAGATTGAAGGCTTTGGGTATCTGACTTGGACGGACATGAAACATGTTGTGAGGAGCCTTATTGTGTTTAAATAA 795 0.4239 MISRGPSNSCPFLLKPDITAPGTSILAAWPSDIPVALLGSENLLSNVNILTGTSMACPHVAGVAALLKGVHPDWSPAAIRSAIMTTSDNSTTLRNPSKTDYKPASPLALGVGHVNPNKALDPGLVYDVGVQDYVNLLCALNFTQKNIMIITRSSFNNCSKPSLDLNYPSFIAFFNGNDSSKESRVSWEFQRTMTNVGDGQTIYTTSVTFIKGFSVSVVPNKLVFKEKNEKLSYNLRIEGPKIEGFGYLTWTDMKHVVRSLIVFK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1089 264 PANTHER PUTATIVE-RELATED 3 256 - -
Aed2g1089 264 Pfam Fibronectin type-III domain 164 262 IPR041469 -
Aed2g1089 264 SUPERFAMILY Subtilisin-like 2 124 IPR036852 GO:0004252|GO:0006508
Aed2g1089 264 Gene3D Peptidase S8/S53 domain 3 133 IPR036852 GO:0004252|GO:0006508
Aed2g1089 264 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 256 IPR045051 -
Aed2g1089 264 Pfam Subtilase family 7 95 IPR000209 GO:0006508|GO:0008236
Aed2g1089 264 Gene3D - 137 264 - -
Aed2g1089 264 ProSiteProfiles Serine proteases, subtilase domain profile. 1 120 - -
Aed2g1089 264 ProSitePatterns Serine proteases, subtilase family, serine active site. 52 62 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1089 Aed-Chr2 8792889 8794059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1089 3 252 Subtilisin-like Serine Gene Family AT5G67090 50.781 1.76e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1089 - - gmx:100787831 421.009