Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1084 ATGCCGGGCCTGGTGATCCTCTACGCCAGCATAGTGAAGAAAAAGTGGGCCGTGAACTCCGCGTTCATGGCCCTCTATGCCTTCGCGGCGGTCCTCATATGCTGGGTGCTCGTCTGTTACCGAATGGCCTTCGGTGACAGACTCTTTCCCTTTTGGGGGAAGGGCGCCCCGGCACTCGGGCAGAGGTTCCTGGCGCGCCGTGCCCGAGTGCCAGAGACCACCCACTACCACAAGGACGGCTCGGTCGAGAGCCTTACCTCGGAGCCATGGTTTCCTATGGCTTCGATTGTGTATTTCCAGTTCACTTTCGCGGCGATCACGCTTATTTTGCTGGCGGGATCGGTTCTTGGGAGGATGAACATCAAGGCGTGGATGGCTTTTGTGCCTCTTTGGCTTGTTTTTTCGTACACTGTTGGGGCTTTTAGTCTTTGGGGTGGTGGGTTTCTCTACCATTGGGGGGTTATTGACTACTCTGGAGGGTATGTTATTCATCTTTCTTCTGGAATCGCCGGCTTCACTGCTGCTTATTGGGTTGGGCCAAGGTTGAAGAGTGACAGGGAGAGGTTCCCACCTAACAACGTGCTGCTGATGCTAGCCGGTGCAGGGTTGCTGTGGATGGGGTGGTCGGGGTTCAACGGCGGAGCGCCATATGCAGCCAACATTGATGCTTCCATCGCCGTGCTCAACACCAACATCTGCGCCGCCACCAGCCTCCTTCTATGGACCTCTCTCGACGTTGTTTACTTCGGCAAGCCGTCGGTGATCGGAGCTGTTCAGGGCATGATGACCGGACTCGTTTGCATCACCCCAGGAGCAGGGCTTGTGCAATGTTGGGCAGCTATAGTGATGGGAATACTTTCAGGGAGCATTCCATGGGTCACCATGATGATCCTCCACAAGAAGTCAGCCCTTCTACAGAAGGTAGATGACACCCTAGGAGTGTTCCACACACACGCCGTGGCTGGCCTATTGGGTGGCCTCCTCACAGGCCTCTTAGCAGAACCTGAGCTTTGTAGGCTCATATTGCCAGTGAAAAACACAAGGGGTGCCTTCTACGGCGATGGCGGCGGTGTTCAGTTTCTGAAGCAACTGGTGGCAGCATGTTTCATAGCCGGATGGAACTTGGTCTCCACCACACTGATTCTCCTGGCCATACAGCTTTTCATACCCTTGAGGATGCCCGATGAGCAGCTTGAGATTGGCGATGACGCTGTCCATGGCGAGGAGGCCTATGCCCTTTGGGGTGATGGTGAAAAGTATGATCCAACAAGGCATGGATCGTCAAGAGTGCTGGATAAGACTTCAGCATCGCCCCGTGATGATGTAAAGGGAGCAAGGGGTGGAACCATAGATTTGTGA 1359 0.5482 MPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGDRLFPFWGKGAPALGQRFLARRARVPETTHYHKDGSVESLTSEPWFPMASIVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLVFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIDASIAVLNTNICAATSLLLWTSLDVVYFGKPSVIGAVQGMMTGLVCITPGAGLVQCWAAIVMGILSGSIPWVTMMILHKKSALLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPELCRLILPVKNTRGAFYGDGGGVQFLKQLVAACFIAGWNLVSTTLILLAIQLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSSRVLDKTSASPRDDVKGARGGTIDL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1084 452 SUPERFAMILY Ammonium transporter 2 393 - -
Aed2g1084 452 Gene3D Ammonium transporter AmtB like domains 1 414 IPR029020 -
Aed2g1084 452 PANTHER AMMONIUM TRANSPORTER 1 449 - -
Aed2g1084 452 ProSitePatterns Ammonium transporters signature. 156 181 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aed2g1084 452 Pfam Ammonium Transporter Family 2 411 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed2g1084 452 PANTHER AMMONIUM TRANSPORTER MEP2 1 449 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed2g1084 452 PRINTS Rhesus blood group protein signature 100 116 IPR002229 GO:0005887
Aed2g1084 452 PRINTS Rhesus blood group protein signature 226 248 IPR002229 GO:0005887
Aed2g1084 452 PRINTS Rhesus blood group protein signature 319 335 IPR002229 GO:0005887
Aed2g1084 452 PRINTS Rhesus blood group protein signature 195 213 IPR002229 GO:0005887
Aed2g1084 452 PRINTS Rhesus blood group protein signature 281 299 IPR002229 GO:0005887
Aed2g1084 452 MobiDBLite consensus disorder prediction 416 452 - -
Aed2g1084 452 TIGRFAM amt: ammonium transporter 1 411 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1084 Aed-Chr2 8751426 8756931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1084 93 452 Inorganic Solute Cotransporters AT2G38290 76.667 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1084 K03320 - gmx:100798599 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1084 2 8751426 8756931 Aed2g1084 2 8751426 8756931 ECH