Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1081 ATGTCCGTAATCGACATTCTCTTCCGTGTCGACAACATATGCCAAAAATATGACAAATACGACATCGATAAGCAGCGCGAGCTCAACGCCTATGGCGACGACGACTTTGCTCGCCTCTACGAGGCTGTTGACACCAGCATTCAAACTGCTCTCGATAAATCGGAGCTTGCTTCCACGGAGACCAACAGGGCAGCTGCTGCGGCTATGAATGCAGAGGTTCGTCGAACCAAGGGTAGACTCACCGAAGACATTCCTAAACTTCGCAAATTGGCGCAAAAAAAGCTTAAGGGTATGACAAAAGAGGACATAGCGGTTCGTCAAGATCTTGTGCTGGCACTGCCGGAGAGAATCCTAGCAATACCAGATGGTATTTCTAGTGCGGGTATTCAAGCTGCAGGATGGACCGCTTCCTCATCCCAGCCGCATATCAAGTTTGATTCACCAGACGGACATGTTGACAGTGAGTATTTCCAACAAACTGAAGAATCCAGCCAGTTCAGAGAAGAGTATGAGATGCGCAGGACCAAACAGGATGAAGGACTTGATTTCATATCAGAGGGATTGGATACCTTGAAGAATCTGGCCCGTGATATGAATGAGGAATTGGATCGCCAAGTTCCTCTAATGGATGAAATTGACTCAAAGGTGGATAGGGCAGCAGCTGATGTGAGAAACACTAACGTAAGGCTGAAGAAAACTCTCACTGAGATAAGGTCTAGTCGAAATTTCTGCATCGACATTGTTCTGCTCTGTGTTCTTCTTGGAGTCGTTATGTATTTATACAAGTAA 789 0.4626 MSVIDILFRVDNICQKYDKYDIDKQRELNAYGDDDFARLYEAVDTSIQTALDKSELASTETNRAAAAAMNAEVRRTKGRLTEDIPKLRKLAQKKLKGMTKEDIAVRQDLVLALPERILAIPDGISSAGIQAAGWTASSSQPHIKFDSPDGHVDSEYFQQTEESSQFREEYEMRRTKQDEGLDFISEGLDTLKNLARDMNEELDRQVPLMDEIDSKVDRAAADVRNTNVRLKKTLTEIRSSRNFCIDIVLLCVLLGVVMYLYK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1081 262 SMART tSNARE_6 165 233 IPR000727 -
Aed2g1081 262 SUPERFAMILY SNARE fusion complex 165 232 - -
Aed2g1081 262 PANTHER SYNTAXIN-72 1 261 - -
Aed2g1081 262 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aed2g1081 262 Gene3D - 171 232 - -
Aed2g1081 262 PANTHER SYNTAXIN 1 261 IPR045242 -
Aed2g1081 262 CDD SNARE_Qc 176 232 - -
Aed2g1081 262 Pfam SNARE domain 208 257 IPR000727 -
Aed2g1081 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1081 Aed-Chr2 8716897 8718619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1081 1 261 SNARE and Associated Proteins AT3G09740 67.300 4.30e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1081 K08506 - gmx:100777251 444.121