Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1077 ATGGCTCCAAAAAATCTCTTAGCTCTCTTCATCTTTCTCATTCTCCTAGTTACTAATTCCACTGCTATTTCCTTCCTATTCCATGGCTTCAATGAAAGTGAAACAAACTTCACCCTTGAAGGGAATTCAAATATCACACCCCAAGGCACACTCAAGCTCACCAATAGACAAAACAACATTGTTGGCCATGCATTCTACAACCAACCCATCAAAATGCTAAAGAAAACAACAAACTCTTCATCATCCCAAACAAAAGTTTCTTCTTTTAGCACATGCTTTGTTTTCTCAATTGTGTCACCAAGCTCAGGCCCTGGTGGATTTGGTCTAGCCTTCACCATAGCTTCCACAACAAAATTCCCAGAAGCTGAAGGTGGACACTTTCTTGGTCTCTTCAACCCTTCCAATGATAGGAGCACCTCAAACCACATCTTGGTGGTTGAGTTTGACACTGTGAATGGCTACAAGGATGACACTGACACTGAAGGAAACCATGTTGGTGTAAACCTAAATGGCATGCACTCAGATGCTGCTGAGCCTGCAGCATATTTTGAAGAAGGCATGGATGCTAAGAAGGAAGAGTTCACCATGGAGAAGGAAGATGCTGTTTGTGCTTGGATTGAATATGATGGTGGAACACAAACCTTGAATATCACAGTAGCTCCTTATTTACATCTAAAACCAAGCAAGCCACTTATATCCAAGCCACCACCAAAGGAGAAAGGTGCATCCTCTTTTCCTTGGATCAAGGTTGTGATAGCCATCTTGTCTGCTTTGACCATCACCTTGTTGTGCCTCTTGTTTATTGTGGCACTCTACAAGAGATACAGCATGGTGTTTGAAACACTTGAGGATTGGGAGATGGATTGTCCTCACAGGTTCAGATATAGAGATCTTCACATAGCAACAAAAGGGTTCATAGAGACCCAGATGATTGGAGTTGGAGGCTTTGGTTGTGTGTACAAAGGTGTGTTACCTTACTCAGGAACTGAGGTTGCTGTCAAAAGGATCATGACAAGTCCACTGAGAGGAATGAGGGAGTTTGCAGCTGAGATTGAAAGCTTAGGAAGACTGAGACACAAGAATCTGGTCAACCTTCAAGGGTGGTGCAAGCACAAGAGTGATCTTATACTAATCTATGACTACATTCCAAATGGGAGCCTTGACACTCTCTTATTCAACAAAAACTTTGCTTTGGATTGGAACCAGAGATTCAACATCCTCAAAGGTAGGATTCTTGAAGTGGTTGATCCTAAGATGGATTCGGTTTATGATGAGGAGGAAGTGGAGTTGGTGCTGAAATTGGGACTCTTGTGTGCTCAATACAAAGGTGATTTTAGACCTTCCATGAAACAAGTGGTTAGATACATGAACTTTGATGACCCTCTTCCTGATATCACTGATTGGAGACACTATGATTCTCAAAGCAGCACAACTAGCTTAGGTTTCTTAGATGCCATACCTACTGGTAAGACTGTGTCTTCAAATAGTTTATCCTCCATTGGCAGAAGTACAGTGCCAATAAAAACTGGTAGATAG 1536 0.4206 MAPKNLLALFIFLILLVTNSTAISFLFHGFNESETNFTLEGNSNITPQGTLKLTNRQNNIVGHAFYNQPIKMLKKTTNSSSSQTKVSSFSTCFVFSIVSPSSGPGGFGLAFTIASTTKFPEAEGGHFLGLFNPSNDRSTSNHILVVEFDTVNGYKDDTDTEGNHVGVNLNGMHSDAAEPAAYFEEGMDAKKEEFTMEKEDAVCAWIEYDGGTQTLNITVAPYLHLKPSKPLISKPPPKEKGASSFPWIKVVIAILSALTITLLCLLFIVALYKRYSMVFETLEDWEMDCPHRFRYRDLHIATKGFIETQMIGVGGFGCVYKGVLPYSGTEVAVKRIMTSPLRGMREFAAEIESLGRLRHKNLVNLQGWCKHKSDLILIYDYIPNGSLDTLLFNKNFALDWNQRFNILKGRILEVVDPKMDSVYDEEEVELVLKLGLLCAQYKGDFRPSMKQVVRYMNFDDPLPDITDWRHYDSQSSTTSLGFLDAIPTGKTVSSNSLSSIGRSTVPIKTGR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1077 511 CDD lectin_legume_LecRK_Arcelin_ConA 23 233 IPR001220 GO:0030246
Aed2g1077 511 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 235 IPR013320 -
Aed2g1077 511 Gene3D - 20 239 - -
Aed2g1077 511 Gene3D Phosphorylase Kinase; domain 1 273 381 - -
Aed2g1077 511 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 243 409 - -
Aed2g1077 511 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 409 487 - -
Aed2g1077 511 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 10 234 - -
Aed2g1077 511 Pfam Legume lectin domain 23 234 IPR001220 GO:0030246
Aed2g1077 511 ProSitePatterns Protein kinases ATP-binding region signature. 311 334 IPR017441 GO:0005524
Aed2g1077 511 PANTHER - 243 409 - -
Aed2g1077 511 PANTHER - 409 487 - -
Aed2g1077 511 PANTHER - 10 234 - -
Aed2g1077 511 ProSiteProfiles Protein kinase domain profile. 305 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1077 511 Pfam Protein kinase domain 307 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1077 511 MobiDBLite consensus disorder prediction 492 511 - -
Aed2g1077 511 SUPERFAMILY Protein kinase-like (PK-like) 291 408 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1077 Aed-Chr2 8697655 8700913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1077 396 481 Receptor kinase-like Gene Family AT5G01560 43.678 5.29e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed2g1077 Lectin_legB 3.1e-54 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1077 - - gmx:100792854 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1077 2 8697655 8700913 Aed2g1077 2 8697655 8700913 ECH
Aed9g2079 9 24005442 24007493 Aed2g1077 2 8697655 8700913 PCT