Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1054 ATGGGTTATGCATTAGATGGAAAACAGACAAAAGCAGGTTGTTTCTCATCATTGCATGGACGAAATGGTATCTACAAGACTCATTTGTTTGGTAGAGCTAGCATCATCGTTTCCACTCCTGAGATGTGCAAACGAGTGTTGGCAGATGACGAAAACTTTAAGATGGGTTATCCAAAATCTGCCCTTAATGAGGTGCTGCGATGTACGCCCTTGCTTGAAGTCCCTAGTAGCGAACAAAAACATTTACGAAAATTAGTCACTACTCCCATGATCGGTCAGAACGCTGCGGCGATGTACATAGAACGTATCGAGGAGATAGTGATTAATTCATTAGAAGAGTTATCCAGCATGAAGGATCCGGTTCTATTTCTCAAAGAGATGGAGAAGGTTTCCTTTAAAGTCATCGTTCACATCTTCATGGGCTCTAAGAATCAATCCGCCATTACTAAAATCAGTGATTTATTTGGTGAATTTTCCGCTACTATTCCATTATTTTGTTTGCCAATTAACTTGCCCGGTTTTGCTTACCATAAATCAATCAAGTTATGCAAGAATCTAGTCAAAGTAATTCGAGCAGCTGTGGATGAAAGGAAGTTGATGCTAAAAAATGGTGAAATTTTGGAAAAAGAGATCTTAGGGGAAAATGGTGAGAAACTTGAAGATCAAGACATTGCTGAGATGTTGCTAGTGTTACTGTTTGCTGGCCACGAAAGCACTGCAGGAAGAGCAAGAAGAAATCGTGAAGGCAAGACCGGCATCACAGACACAAATAAATTGAATCTTATTATTTCTTGTATTGTAATTAATGAAGTGTTACGCCGTACCAATCTTGCTTTTGCACTTTTTCGAGAGACAACTGCCGAAGTCAACATCGATGGTTATACCATACCACAGGGATGGAAAGTTCTAGTTTGGGTAAGGGATATTCATATGAAACCTGAATTTTACCCAAATCCAGAAGAATTTAATCCATCGAGATGGGAGAATTCCAATGCTAAAGCATCAAACTTCATTCCTTTCGGACATGGAGGTAGGTACTGTCCAGGAAATGAAATATCCAAACTTGAGATGTCCATATTCCTACATCATTTTCTTCTGAAGTACAAGCTGGAGCAAATAAATCCGGATGGTCCTGTTAGTAGCTTGCCATACGCTAGGCCCAAAGACAAGTGTCTTGCTAAGGTGATAAAGGTGACTTGA 1200 0.3983 MGYALDGKQTKAGCFSSLHGRNGIYKTHLFGRASIIVSTPEMCKRVLADDENFKMGYPKSALNEVLRCTPLLEVPSSEQKHLRKLVTTPMIGQNAAAMYIERIEEIVINSLEELSSMKDPVLFLKEMEKVSFKVIVHIFMGSKNQSAITKISDLFGEFSATIPLFCLPINLPGFAYHKSIKLCKNLVKVIRAAVDERKLMLKNGEILEKEILGENGEKLEDQDIAEMLLVLLFAGHESTAGRARRNREGKTGITDTNKLNLIISCIVINEVLRRTNLAFALFRETTAEVNIDGYTIPQGWKVLVWVRDIHMKPEFYPNPEEFNPSRWENSNAKASNFIPFGHGGRYCPGNEISKLEMSIFLHHFLLKYKLEQINPDGPVSSLPYARPKDKCLAKVIKVT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1054 399 PRINTS E-class P450 group I signature 347 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 PRINTS E-class P450 group I signature 337 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 PRINTS E-class P450 group I signature 305 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 Gene3D Cytochrome P450 266 397 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 SUPERFAMILY Cytochrome P450 15 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 PANTHER CYTOCHROME P450 26 267 376 - -
Aed2g1054 399 PANTHER CYTOCHROME P450 26 13 241 - -
Aed2g1054 399 Gene3D Cytochrome P450 10 241 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 PANTHER CYTOCHROME P450 88D6 267 376 - -
Aed2g1054 399 PANTHER CYTOCHROME P450 88D6 13 241 - -
Aed2g1054 399 Pfam Cytochrome P450 23 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 Pfam Cytochrome P450 267 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1054 399 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 340 349 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1054 Aed-Chr2 8405688 8411311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1054 14 398 Cytochrome P450 AT2G32440 38.129 2.88e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1054 K04123 K17875 ag:BAG68929 428.328