Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1052 ATGGGACACAACACTTGTCATCATGTCAATGATTTCCACACAGACCCTTTTCATCTCAGCCTCTCTTTTGCTTCAAATGGTGATAGGAGGAGTAAAAAAAGTGGTAGTGGTGGTTTCATTTGCTTAGCCCTTTTTTCTTTTCTTTTGGTTTCCACCATACAGAATGTTTCAGGCAACAACTTGTGGGATGGGGTGGTGGTGACTCAGGCTGATTTTCAAGCCCTTAGGGCTATTAAGAATGAGATTATTGACCCCAATGGTGTTCTTAGAAGCTGGAATGACAGTGGTGTAGGTGCTTGTTCAGGAGGCTGGGCTGGAATCAAGTGTGTGAATGGTGAAGTCATTGCAATTCAGCTTCCTTGGAGAGGGTTAAGTGGCAGAATCTCAGACAAAATTGGCCAGCTTCAGTCTCTTAGGAAGCTGAGTCTCCATGACAATGCTCTTGGTGGTTCAGTTCCTTTGACACTTGGCTTGCTTCCTAACCTCAGAGGAGTTTATCTCTTCAACAACAAGCTTTCAGGTTCTGTCCCTCCTTCCCTTGGAAACTGTCCAATGCTTCAGTCTCTTGATATTAGCAACAATGATCTTAGTGGTAAAATCCCTCCCAGTTTAGCAAGGTCCTCGAGGATATTCAGGATCAATTTGAGCTTCAACTCACTCTCTGGATCCATTCCTAGTGGCCTCACTATGTCTCATTCTCTCACCATTCTTGCACTCCAACACAACAATCTCTCTGGCTCTATCCCAGAATCTTGGGGTGGAAAGCTTCAAGTTTTGACCCTTGATCATAATTTCATTTCTGGAACCATCCCTGCTTCTCTAGGGAAGCTAGCCTTTCTTCAAAATGTTTCTTTGAGTCATAACCAGATTGTAGGGCCTATTCCAAGTGAACTAGGTGCACTTTCCAGGCTTCAGATTCTTGATCTTTCAAACAATGCCATCAATGGAAGCCTTCCTGCTAGCTTCTTCTCTAATCTCTCCTCTCTTGTTTCCTTGAATCTAGAGAGCAACCACCTTGCAAACCACATTCCAGATTCTCTGGACAGGAGGTTGCACAACCTTTCTGTGCTTAACCTGAAGAACAATAAGCTTGATGGCCAAATCCCACCAACAATTGGGAACATCTCAAGCATTAGACAAATTGATTTCTCAGAGAATAACTTAGTTGGAGAGATTCCAGATTCTTTTACCAAACTTGCAAATCTCACATCATTCAATGTCTCTTACAACAACCTATCTGGTCCTGTCCCATCTCTACTCTCCAAAAGATTCAATGCTAGCTCTTTTGTTGGGAATCTTGAGCTATGTGGTTTCATCAGTTCAAAACCATGCCTTTCTTCACCCCCTCCTCATAATAATCTTCCATCTCAATCACCACAAGCTCCTTCCAAGTCACATCACCACAAACTAAGCACCAAGGACATAATCCTCATAGTAGCAGGTATTCTCCTGTTGATTCTGTTAGTACTGTGCTGCTCCTTGCTGTGTTGTTTGATCAGGAGAAGAGCTGCTTCAAGCAGAAAGAGTGGCAAGAACACTGCTAAGGCTGCAGCTGCAAGGAGTGTTGAGAAAGGTGCCTCAGCTGGTGGTGGTGATGTTGAGTCTGGAGGTGAAGCTGGTGGCAAACTGGTTCACTTTGATGGACCCTTTGTGTTTACTGCTGATGATCTTTTGTGTGCAACTGCTGAGATAATGGGAAAAAGTGCTTATGGAACTGCTTACAAAGCAACACTGGAAGATGGTAACCAAGTTGCTGTGAAGAGGTTGAGGGAAAAGACCACTAAAGGGCAGAAGGAGTTTGAAACTGAGGTTGCTGCACTTGGCAAAATCAGACACCCAAATCTCTTGGCACTTAGAGCATACTATTTGGGACCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGAAGCTTAGCATCATTCCTTCATGCTCGAGGGCCTGAAATTGTCATTGAATGGCCAACAAGGATGAAGATAGCAATCGGAGTTGCACATGGCCTGAGCCACCTCCACAGCCAGGAGAACATCATCCACGGCAATCTCACATCAAGCAACATACTGCTAGACGAGCAAACAGAAGCTCACATAACAGACTTCGGCCTCTCAAGACTAATGACACCTTCTGCCAACACCAACATCATCGCCACTGCGGGGAGTCTTGGCTACAACGCTCCCGAGCTCTCAAAGACCAAGAAGCCTAGCTCAAAGACTGATGTCTACAGCCTTGGAGTCATCATGCTGGAGCTCCTGACGGGGAAGCCACCCGGGGAGCCGACGAATGGCATGGACTTGCCACAATGGGTGGCCTCCATAGTGAAGGAGGAGTGGACTAATGAAGTGTTTGATTTGGAACTCATGAGGGATGCACCAGCCATAGGGGATGAGTTGCTTAATACGTTGAAGTTGGCTTTGCATTGTGTTGATCCTTCTCCTGCTGCTAGGCCTGAAGTTCAGCAGGTTCTGCAGCAGTTGGAGGAGATTAAACCAGAGTTGTTGTTGTTGGCTGCAGGGGATGATGATGATGGAGCTAAGGTTCAAACAACAACTACTACTGAGTAA 2568 0.4533 MGHNTCHHVNDFHTDPFHLSLSFASNGDRRSKKSGSGGFICLALFSFLLVSTIQNVSGNNLWDGVVVTQADFQALRAIKNEIIDPNGVLRSWNDSGVGACSGGWAGIKCVNGEVIAIQLPWRGLSGRISDKIGQLQSLRKLSLHDNALGGSVPLTLGLLPNLRGVYLFNNKLSGSVPPSLGNCPMLQSLDISNNDLSGKIPPSLARSSRIFRINLSFNSLSGSIPSGLTMSHSLTILALQHNNLSGSIPESWGGKLQVLTLDHNFISGTIPASLGKLAFLQNVSLSHNQIVGPIPSELGALSRLQILDLSNNAINGSLPASFFSNLSSLVSLNLESNHLANHIPDSLDRRLHNLSVLNLKNNKLDGQIPPTIGNISSIRQIDFSENNLVGEIPDSFTKLANLTSFNVSYNNLSGPVPSLLSKRFNASSFVGNLELCGFISSKPCLSSPPPHNNLPSQSPQAPSKSHHHKLSTKDIILIVAGILLLILLVLCCSLLCCLIRRRAASSRKSGKNTAKAAAARSVEKGASAGGGDVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIEWPTRMKIAIGVAHGLSHLHSQENIIHGNLTSSNILLDEQTEAHITDFGLSRLMTPSANTNIIATAGSLGYNAPELSKTKKPSSKTDVYSLGVIMLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPAARPEVQQVLQQLEEIKPELLLLAAGDDDDGAKVQTTTTTE 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1052 855 CDD STKc_IRAK 565 830 - -
Aed2g1052 855 Gene3D Transferase(Phosphotransferase) domain 1 637 841 - -
Aed2g1052 855 SMART LRR_typ_2 301 325 IPR003591 -
Aed2g1052 855 SMART LRR_typ_2 351 375 IPR003591 -
Aed2g1052 855 SMART LRR_typ_2 399 422 IPR003591 -
Aed2g1052 855 SMART LRR_typ_2 135 158 IPR003591 -
Aed2g1052 855 SMART LRR_typ_2 159 183 IPR003591 -
Aed2g1052 855 SMART LRR_typ_2 326 350 IPR003591 -
Aed2g1052 855 Pfam Protein tyrosine and serine/threonine kinase 563 827 IPR001245 GO:0004672|GO:0006468
Aed2g1052 855 PRINTS Leucine-rich repeat signature 301 314 - -
Aed2g1052 855 PRINTS Leucine-rich repeat signature 186 199 - -
Aed2g1052 855 Gene3D Ribonuclease Inhibitor 208 322 IPR032675 -
Aed2g1052 855 SUPERFAMILY L domain-like 105 436 - -
Aed2g1052 855 Pfam Leucine Rich Repeat 186 204 IPR001611 GO:0005515
Aed2g1052 855 Gene3D Phosphorylase Kinase; domain 1 565 636 - -
Aed2g1052 855 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 39 846 - -
Aed2g1052 855 SUPERFAMILY Protein kinase-like (PK-like) 563 832 IPR011009 -
Aed2g1052 855 Gene3D Ribonuclease Inhibitor 323 446 IPR032675 -
Aed2g1052 855 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 39 846 - -
Aed2g1052 855 Pfam Leucine rich repeat N-terminal domain 70 109 IPR013210 -
Aed2g1052 855 Gene3D Ribonuclease Inhibitor 67 207 IPR032675 -
Aed2g1052 855 ProSiteProfiles Protein kinase domain profile. 559 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1052 Aed-Chr2 8369586 8373457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1052 62 832 Receptor kinase-like Gene Family AT3G51740 68.935 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed2g1052 PK_Tyr_Ser-Thr 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1052 - - gmx:100799290 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2199 3 25568560 25571146 Aed2g1052 2 8369586 8373457 ECH
Aed2g1052 2 8369586 8373457 Aed2g1052 2 8369586 8373457 ECH