Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1038 ATGGGAGGGTGTTGCAGTTGCCATGTTTCATTTGCACGCAAGGTGAATGGTGAGGAATGTGAATGTAGCCATAATCATGATGGTGGTGCATGTAAACATGGTGGGGTCAGGGTCATGTTAAGAGGGTCCTCAACGTTTGTGTCAATGTATAGCCAAAAGGGTTCAAAAGGAGTTAATCAAGATGCTTCGATAGTGTGGCAGAACTTCACTGGGCAAAAGGGCATGACTTTTTGTGGCGTGTTTGATGGTCATGGTCCTCTAGGACACAAGTTCTCACAGTGCATACGTGACAAGATACCCTCAAAACTCTCAGCATCAATCATACAACAGTCACAAGAAAATGCCATGATGAAACACCACGATGCTAATATTGCTACTACAGATGGTGGCAGCAGTCGTAGTGATGTACATGTTGTTGAGGATAACCAAAACATGTCATTTCCTTCATGGGAGGGAACCTTTAAGAGGTGCTTCAATGAAGTAGATGAAACCTATGCCAAGAAAATTGACACTACTGGATATCGTGGTGGTAGCACTGGTGGTGGCCAATTAATAATTGGCAATGTAGGGGATTCTCGTGCTGTTCTTTGCAGAAGAGCACATGACAACAATCTTATTCCTATATGGGATGTGCTAACAAACAGTGAAGTGATAAACATAGTTGCTTCAGCACCAAAAAGGTCCGAGGCAGCCAAATTGTTAGTAAACTATGCTGTTCGAGCATGGAGACGGCAGTATTGTAGCAAGGTTGATGATTGTACAGCCATATGCTTGTTCCTGAAGGATTAG 789 0.4335 MGGCCSCHVSFARKVNGEECECSHNHDGGACKHGGVRVMLRGSSTFVSMYSQKGSKGVNQDASIVWQNFTGQKGMTFCGVFDGHGPLGHKFSQCIRDKIPSKLSASIIQQSQENAMMKHHDANIATTDGGSSRSDVHVVEDNQNMSFPSWEGTFKRCFNEVDETYAKKIDTTGYRGGSTGGGQLIIGNVGDSRAVLCRRAHDNNLIPIWDVLTNSEVINIVASAPKRSEAAKLLVNYAVRAWRRQYCSKVDDCTAICLFLKD 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1038 262 ProSiteProfiles PPM-type phosphatase domain profile. 46 262 IPR001932 -
Aed2g1038 262 PANTHER ALPHABET, ISOFORM E-RELATED 1 208 - -
Aed2g1038 262 SMART PP2C_4 36 258 IPR001932 -
Aed2g1038 262 CDD PP2Cc 46 260 IPR001932 -
Aed2g1038 262 PANTHER ALPHABET, ISOFORM E-RELATED 208 262 - -
Aed2g1038 262 Gene3D - 208 261 IPR036457 -
Aed2g1038 262 Gene3D - 36 207 IPR036457 -
Aed2g1038 262 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 208 - -
Aed2g1038 262 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 208 262 - -
Aed2g1038 262 SUPERFAMILY PP2C-like 39 261 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1038 Aed-Chr2 8275162 8278378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1038 37 208 PP2C-type Phosphatase Gene Family AT5G36250 34.392 1.07e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1038 - - vra:106755106 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1038 2 8275162 8278378 Aed2g1038 2 8275162 8278378 ECH