Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1032 ATGTCTTTCAGTTTCACTGATCTTCTTTCCACGACCAACAATAACAATAACAATAACAATAACAATACCATCATGATGACCATGGATGATGATCCCTTTGGACTTGAATTTGCTAATAGCTTCAAGTCAGCTTCACTTCCTCTCTCTCCTTCTTCGTCAATCTACCCTTCTTCTTATGCTGAGTTCGCTCCTGGTTTTGCCCCACCAACAACCACACACTCTTTCAATTCACCCCTCTTTTTTTCTTCTCATAATGTTTCTGCATCTTACACAACTGAGCCATCTTCTAGCATGAACTTCAACATGAGAAATAGTTCAACGGAGGGTCAACAAGAAGGTAACAACAAGGAGGAAGAGAGAAACTACTCTGACCTCTCCTTCCTAACAAAAACACACCACGTGCCTCTCTTTCCATCTTCCACAACCATGTTTCAAATGGAGCCACTAAAGAAACAGGACACAATGATGTTCAGTGAAGCTGCAAAGAAAACAGATTTCTCATCTGAGATAACAGAAACAAAATCTGAATATCCATCCACTCAGGGCTTCTCAACAGCATTGGCCTCAATAAAACCTGAAACACAAACCAATTCTGTTCAATTTAACTCCACTTATGCTCCTAAGTCTACTAGAGAGCAAAGGAAATCAGAAGATGGTTACAATTGGAGGAAGTATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCGCGAAGTTATTACAAGTGCACTCACCCGAGTTGCCCTACAAAGAAGAAAGTTGAGAGGTCTTTGGAGGGACATATCACTGAAATAGTATACAAGGGAAGCCACAATCATCCCAAGCCTCATCCTAGAAAAAATGGTTCTCTAGCAATTCATCAAGCTTCTTCATCCTGCACAAATTCGGGGATTTCTGATCAGTCTGTAGGAGAGGAAGATCTTGATCAAACATCACAAACTAGTCATTCTGGAGGGGGTGATGATGACCTTGGATCTGAGGCCAAAAGATGGAAGGGGGAGAATGAAAATGATGGCCATTCCTATTCCTCTGCTGGGAGTAGAACTGTTAAGGAGCCTAGAGTTGTGGTTCAAACCACAAGTGAAATTGACATACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAAGAGCTGCACATGACCTGAAAGCTGTGATTACAACTTATGAAGGAAAACACATCCATGATGTACCTTTAGGAAGAGGAAACTCAAGCTATAACATGAACAGAACTTCTCTAAACAACACCAACACCAACACCACGAACACGAACACCAACAACACCAACACCAGCAGTGTAACAGTTCCTGCACCCATAAGGCCTTCAGCAGTGACTAACTATTCTAACTCAGCAAGTTTCACCAATTCACTTCATGACACAAAGCCACCAACATCTGCAAGTCAAGAACCTTTTCCAATGGACTTGTTGCTGAGCCCCGGAAACATTGGATTTTCGGCTAATGACTCATTCCTTCAGTCTTTTTTGTCAAAGAACTTTTGA 1503 0.4145 MSFSFTDLLSTTNNNNNNNNNNTIMMTMDDDPFGLEFANSFKSASLPLSPSSSIYPSSYAEFAPGFAPPTTTHSFNSPLFFSSHNVSASYTTEPSSSMNFNMRNSSTEGQQEGNNKEEERNYSDLSFLTKTHHVPLFPSSTTMFQMEPLKKQDTMMFSEAAKKTDFSSEITETKSEYPSTQGFSTALASIKPETQTNSVQFNSTYAPKSTREQRKSEDGYNWRKYGEKQVKGSENPRSYYKCTHPSCPTKKKVERSLEGHITEIVYKGSHNHPKPHPRKNGSLAIHQASSSCTNSGISDQSVGEEDLDQTSQTSHSGGGDDDLGSEAKRWKGENENDGHSYSSAGSRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKRAAHDLKAVITTYEGKHIHDVPLGRGNSSYNMNRTSLNNTNTNTTNTNTNNTNTSSVTVPAPIRPSAVTNYSNSASFTNSLHDTKPPTSASQEPFPMDLLLSPGNIGFSANDSFLQSFLSKNF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1032 500 MobiDBLite consensus disorder prediction 92 120 - -
Aed2g1032 500 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 377 IPR044810 GO:0003700
Aed2g1032 500 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 377 498 IPR044810 GO:0003700
Aed2g1032 500 MobiDBLite consensus disorder prediction 92 111 - -
Aed2g1032 500 ProSiteProfiles WRKY domain profile. 217 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 MobiDBLite consensus disorder prediction 210 231 - -
Aed2g1032 500 SMART WRKY_cls 365 398 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 SMART WRKY_cls 216 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 377 498 - -
Aed2g1032 500 MobiDBLite consensus disorder prediction 288 352 - -
Aed2g1032 500 MobiDBLite consensus disorder prediction 416 437 - -
Aed2g1032 500 SUPERFAMILY WRKY DNA-binding domain 213 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 SUPERFAMILY WRKY DNA-binding domain 357 399 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 MobiDBLite consensus disorder prediction 337 352 - -
Aed2g1032 500 MobiDBLite consensus disorder prediction 321 336 - -
Aed2g1032 500 MobiDBLite consensus disorder prediction 199 254 - -
Aed2g1032 500 Pfam WRKY DNA -binding domain 217 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 Gene3D WRKY domain 352 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 ProSiteProfiles WRKY domain profile. 360 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1032 500 MobiDBLite consensus disorder prediction 288 319 - -
Aed2g1032 500 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 22 377 - -
Aed2g1032 500 Gene3D WRKY domain 202 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1032 Aed-Chr2 8234663 8238503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1032 211 477 WRKY Transcription Factor Family AT2G38470 46.933 1.73e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g1032 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1032 K13424 - gmx:102666898 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1032 2 8234663 8238503 Aed2g1032 2 8234663 8238503 ECH