Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1014 ATGGATTCTAGTAGGCGTAGTAGTAAAAAAGCATCTATGCAACGCAAGTTGCAACAACTTCGATCGGTTACAAATTCCAGTGCTGTGAACAGAGCCTCAATTATTGTGGATGCCACCAGATACATAGAGGAGCTGAAGCAAAAAGTGGATGGATTGAACTCAGAGCTTGGAACTGGTGAATCATCATCAATCTCCCAAGAAGAACTACCCATGGTCACCGTAGAAACCCTAGAAAGGGGTTTTCTCATTAATGTGTTTTCAGAAAGAAATTGCCCTGGTATGCTTGTAGCAATACTCGACGCTTTCGAAGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTTCAGCTTGAAGCTGTTGGAGGAGAAAGTCAAGAGAATGAAAGCATCGACGCACAAGTGGTGAAGCAAGCAGTGCTGCAAGCAATCCAAAACATGGATTAA 459 0.4314 MDSSRRSSKKASMQRKLQQLRSVTNSSAVNRASIIVDATRYIEELKQKVDGLNSELGTGESSSISQEELPMVTVETLERGFLINVFSERNCPGMLVAILDAFEELGLDVLDARVSCEDTFQLEAVGGESQENESIDAQVVKQAVLQAIQNMD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1014 152 CDD ACT_UUR-ACR-like 92 148 - -
Aed2g1014 152 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 3 152 - -
Aed2g1014 152 Coils Coil 35 55 - -
Aed2g1014 152 MobiDBLite consensus disorder prediction 1 25 - -
Aed2g1014 152 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 152 - -
Aed2g1014 152 ProSiteProfiles ACT domain profile. 83 152 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1014 Aed-Chr2 8017760 8019676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1014 13 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 27.703 5.63e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1014 - - gmx:100499821 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2215 3 25641972 25643515 Aed2g1014 2 8017760 8019676 ECH
Aed9g2121 9 24418225 24419651 Aed2g1014 2 8017760 8019676 ECH
Aed2g1014 2 8017760 8019676 Aed3g2215 3 25641972 25643515 ECH
Aed2g1014 2 8017760 8019676 Aed2g1014 2 8017760 8019676 ECH
Aed3g1916 3 23429254 23430491 Aed2g1014 2 8017760 8019676 ECH
Aed4g2189 4 24665170 24666930 Aed2g1014 2 8017760 8019676 ECH
Aed2g1014 2 8017760 8019676 Aed3g1916 3 23429254 23430491 ECH
Aed2g1014 2 8017760 8019676 Aed4g2189 4 24665170 24666930 ECH