Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1007 ATGGCTGGAAGTTCTCAACAAAGGGTGGTTTTTTCTGACCTCAAACTCATCAAAATCTGTTTGTTCTTATGTCTTATTGGGATAGTTTCCGCTACAGATTTAACTTCTTCCGCAACTTCTGCTGTGAGTTCAGTTAGTTACGACTTAAGCACCAGTTTTTATGGTTTCAAGTGTCCCCTAGGGCTTACTACCATTAAGACAATAGTAACTGCTGCTGTGTGGAAAGAGCCTCGCATGGGTGCTTCATTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGACACTGCAACTTTCCGTGGCGAACAAGGTGCCTTCCCCAACGCTAATTCTCTAAGGGGTTTCGAAGTGATAGACACCATAAAAACTAATCTAGAGATTATGTGCCCTGGGGTTTTCTCTTGTGCTGACATCTTAGCCATTGCTGCAAGGGATTCTGTTGTTGCTGAAAGTGAGTGTTGTAAACTTTATGACACTAGTTGA 483 0.4265 MAGSSQQRVVFSDLKLIKICLFLCLIGIVSATDLTSSATSAVSSVSYDLSTSFYGFKCPLGLTTIKTIVTAAVWKEPRMGASLLRLHFHDCFVQDTATFRGEQGAFPNANSLRGFEVIDTIKTNLEIMCPGVFSCADILAIAARDSVVAESECCKLYDTS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1007 160 ProSiteProfiles Plant heme peroxidase family profile. 48 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 PANTHER PEROXIDASE 40 149 - -
Aed2g1007 160 PANTHER PEROXIDASE 72-RELATED 40 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 SUPERFAMILY Heme-dependent peroxidases 48 149 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 ProSitePatterns Peroxidases active site signature. 80 91 IPR019794 GO:0004601
Aed2g1007 160 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 PRINTS Haem peroxidase superfamily signature 80 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 Gene3D - 49 155 - -
Aed2g1007 160 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 PRINTS Plant peroxidase signature 82 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 PRINTS Plant peroxidase signature 58 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1007 160 Pfam Peroxidase 67 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1007 Aed-Chr2 7941500 7942688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1007 45 149 Peroxidase AT5G05340 59.649 2.51e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1007 K00430 - gmx:100811432 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1007 2 7941500 7942688 Aed2g1007 2 7941500 7942688 ECH
Aed2g1007 2 7941500 7942688 Aed3g1923 3 23498570 23502096 ECH
Aed2g1007 2 7941500 7942688 Aed4g2185 4 24632971 24635381 ECH