Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1004 ATGGTGTCCCAAAAATGTTTCTTTGTTGTCCTCTTCTATGCCTTTGTGTTTGCAGCTTCTGCATCATTGTCACCCTCTGATTACTATGACTACTCGTGCCCTAACGCTTTGAGCACCATTAGAACTGCTGTGGAAGCTGCCGTGCAGAAAGAACCCCGTATGGGCGCGTCCTTGCTACGATTGCACTTCCGTGATTGTTTTGTTAACATGGCAAAAATAGGGCCCCTCACTGGGAATAGAGGTGAAATTCGTTTGAATTGTAGGAAAGTGAATCATTAA 279 0.448 MVSQKCFFVVLFYAFVFAASASLSPSDYYDYSCPNALSTIRTAVEAAVQKEPRMGASLLRLHFRDCFVNMAKIGPLTGNRGEIRLNCRKVNH 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1004 92 PANTHER PEROXIDASE 72-RELATED 6 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1004 92 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1004 92 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1004 92 ProSiteProfiles Plant heme peroxidase family profile. 27 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g1004 92 Gene3D - 25 89 - -
Aed2g1004 92 PANTHER PEROXIDASE 6 69 - -
Aed2g1004 92 SUPERFAMILY Heme-dependent peroxidases 14 68 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1004 Aed-Chr2 7923163 7925414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1004 8 69 Peroxidase AT1G14540 51.613 4.78e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1004 K00430 - gmx:100803619 84.7297