Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1003 ATGGCATCGCGTGTGTATTTCTCGGTTCTTCTCCATGCCTTTGTGTTTGCAACTGTTGCAACCTCAGCTTTCTCACAACTGTCACCTAATTACTATGATTACTCGTGCCCTAATGCTTTGAGCACCATCAAAAGTGTGGTAGAGGCTGCGGTGCAGAGAGAGTCTCGTATGGGGGCTTCATTGCTTCGCTTGCACTTCCATGATTGCTTTGTTAACTATTCGTCTTCTGTTTTTGTTCCTAGCTGCATATATCATCATAAATCTACCATAAACAACATAAATGTTTTATGTTAG 294 0.4184 MASRVYFSVLLHAFVFATVATSAFSQLSPNYYDYSCPNALSTIKSVVEAAVQRESRMGASLLRLHFHDCFVNYSSSVFVPSCIYHHKSTINNINVLC 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1003 97 Gene3D - 27 95 - -
Aed2g1003 97 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Aed2g1003 97 PANTHER PEROXIDASE 19 94 - -
Aed2g1003 97 SUPERFAMILY Heme-dependent peroxidases 7 71 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed2g1003 97 ProSiteProfiles Plant heme peroxidase family profile. 26 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g1003 97 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1003 97 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1003 97 PANTHER PEROXIDASE 72-RELATED 19 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1003 Aed-Chr2 7918594 7919448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1003 25 72 Peroxidase AT1G14540 66.667 9.44e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1003 K00430 - gmx:100802035 124.79