Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1001 ATGGCATCATCACGTGGGTATTTCTTTGTTCTTGTCCATGCATTAGTGTTTGCAGCTCTTGCAACCTCAGCTTTCTCAAAATTGTCACGTAATTACTATGATCATTCGTGCCCTAATGCTTTGAGCACCATCAAAAGTGTCGTGGAGGCTGCTGTGCAAAAAGAGAAACGTATGGGAGCTTCCTTGCTACGCTTGCACTTCCATGATTGCTTTGTTAACCCTCTCACTGGGAATCAAGGTCAAATTCGTGTTAACTGCAGGATTGTGAACTAA 273 0.4322 MASSRGYFFVLVHALVFAALATSAFSKLSRNYYDHSCPNALSTIKSVVEAAVQKEKRMGASLLRLHFHDCFVNPLTGNQGQIRVNCRIVN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1001 90 SUPERFAMILY Heme-dependent peroxidases 10 72 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed2g1001 90 ProSiteProfiles Plant heme peroxidase family profile. 27 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g1001 90 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1001 90 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1001 90 PANTHER PEROXIDASE 72-RELATED 20 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g1001 90 Pfam Peroxidase 45 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g1001 90 PANTHER PEROXIDASE 20 72 - -
Aed2g1001 90 Gene3D - 28 90 - -
Aed2g1001 90 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1001 Aed-Chr2 7907076 7908605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1001 26 73 Peroxidase AT1G14540 60.417 4.15e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1001 K00430 - gmx:121174583 120.553