Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0992 ATGGAGCAAAAAGGAGGTCTGCTTATGCAACGATATGAACTGGGGAGGTTATTAGGCCAAGGAACCTTTGCGAAAGTTTACCATGCTAGGAACATCGTAACTGGCATGAGTGTGGCCATTAAGATTGTTGATAAGGAGAAGATTCTGAAAGTTGGGATGATTAATCAGATCAAGCGCGAAATTTCAGTGATGAGACTAATCAGGCATCCACATGTGGTTGAGCTTTATGAGGTAATGGCCACCAAAACCAAAATTTACTTTGTCATGGAGCATGTAAAAGGCGGTGAGCTCTTTGACAAGGTGTCCAAAGGAAAGCTCAAGCAGGATGATGCTAGGAGATATTTTCAGCAACTGATCAGTGCTGTTGACTATTGCCATAGCCGCGGTGTGTGCCATCGCGATCTGAAACCAGAAAATCTTCTACTAGATGAAAATGAGAACTTGAAGGTCTCAGATTTCGGGTTAAGCGCTCTTGCTGAAACTAGGCACCAAGACGGATTACTCCATACTACATGTGGCACCCCTGCCTATGTTGCTCCGGAAGTGATAAACAGAAGAGGTTATGATGGAGCCAAAGCTGATATTTGGTCATGTGGGGTGATCTTGTATGTTCTATTGGCCGGTTTTCTTCCATTTAAAGACTCAAATCTGATGGAGATGTACAGGAAGATTGGCAAGGGAGAATTCAAATTTCCCAACTGGTTTGCACCGGATGTACGCAGATTGTTGTCGAGAATCTTGGATCCAAACCCGAAGGCAAGGATATCAATTGCCAAAATCATGGAAAGTTCTTGGTTCAAAAAGGGATTAGAGAAGCCTACCATTACTTGGAATGAAGACAACGAGGAACTGGCTCCTCTGGATGCTGATGGAGTATTTGGATCTTGTGAGAATGGAGATCCCATTGAACCAGCAAAAAACTCGAAACCTTGTAACAATTTAAATGCTTTTGACATCATCTCCTATTCCTCGGGCTTTGACTTGTCCGGTTTGTTTGAGGAGACCACCGATCGAAAGAAAGAAGCACGATTTACATCCGACAAACCGGCCTCAATTATCATCTCCAAGCTGGAAGAAATATGCAAGCGTCTCCGGCTGAAAGTGAAGAAGAAAGATGGAGGCTTGATCAAGTTGGAAGGTTCCAAGGAAGGAAGAAAAGGGCCATTGAGTATTGATGCTGAGATTTTTGAGATCACCCCAGTCTTCCATCTAGTTGAGTTAAAAAAGTCTAGTGGAGACACATTGGAGTACCAAAAGCTTTTGAAACAGGAAGTTAGGCCTGCACTCAAGGACATTGTTTGGAACTGGCAAGGAGAAGAGCCACAACATGGAGTAGCAGTGCAGAAAGAGGAACAACCTTCTTATCCTGACATGTCAGAGGCTGTGCCACAACAACCAACTGCTCAATGA 1410 0.4376 MEQKGGLLMQRYELGRLLGQGTFAKVYHARNIVTGMSVAIKIVDKEKILKVGMINQIKREISVMRLIRHPHVVELYEVMATKTKIYFVMEHVKGGELFDKVSKGKLKQDDARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENENLKVSDFGLSALAETRHQDGLLHTTCGTPAYVAPEVINRRGYDGAKADIWSCGVILYVLLAGFLPFKDSNLMEMYRKIGKGEFKFPNWFAPDVRRLLSRILDPNPKARISIAKIMESSWFKKGLEKPTITWNEDNEELAPLDADGVFGSCENGDPIEPAKNSKPCNNLNAFDIISYSSGFDLSGLFEETTDRKKEARFTSDKPASIIISKLEEICKRLRLKVKKKDGGLIKLEGSKEGRKGPLSIDAEIFEITPVFHLVELKKSSGDTLEYQKLLKQEVRPALKDIVWNWQGEEPQHGVAVQKEEQPSYPDMSEAVPQQPTAQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0992 469 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Aed2g0992 469 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0992 469 CDD CIPK_C 315 430 - -
Aed2g0992 469 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Aed2g0992 469 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 448 - -
Aed2g0992 469 PANTHER - 2 448 - -
Aed2g0992 469 MobiDBLite consensus disorder prediction 442 469 - -
Aed2g0992 469 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Aed2g0992 469 Gene3D Kinase associated domain 1, KA1 310 435 - -
Aed2g0992 469 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0992 469 Pfam NAF domain 312 370 IPR004041 GO:0007165
Aed2g0992 469 Gene3D Transferase(Phosphotransferase) domain 1 4 309 - -
Aed2g0992 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Aed2g0992 469 CDD STKc_SnRK3 11 265 - -
Aed2g0992 469 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0992 Aed-Chr2 7845639 7847048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0992 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 66.154 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed2g0992 Pkinase 5.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0992 K07198 - gmx:100815651 856.284