Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0984 ATGTTGAAACTGATCCTTCTGGTCGATATGGACGTGGACATCCTAGGCAAAGGAGCAGTGAAGGTAGTGTATAGGGCATTTGATGAGGTCCTAGGAATAGAGGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTGTTTCATTCACCAGACCTACTTCCAAGGCTTTACTCAGAGGTTCATCTCCTCAAGAACTTGGAACATGACTCCATCATGACCTTCCATGATTCTTGGATTGATGTCAATTGTAGAACCTTCAACTTCATCACCGAATTGTTCACATCTGGCACCCTACGAGAGTATAGAAAGAAGTACCAGAGAGTAGATGTCAGAGCAGTGAAGAATTGGGCACGCCAGATTCTAAGTGGTTTGGAGTATTTGCACAGCCATGATCCTCCTGTGATACATAGAGACCTCAAGTGTGACAATATCTTCATCAATGGCCATTTGGGGCAAGTCAAAATTGGTGACTTGGGCCTTGCAGCCATTCTCCGTGGCTCTCAACATGCACACAGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAACTAGTTGACATATACTCCTTTGGGATGTGCATGATAGAAATTTTTACTTCTGAGTTCCCTTACAGCGAGTGCTCCAACCCTGCTCAGATATACAAGAAAGTTACTTCGGGGAAGCTACCAGAAGCCTTTTACAGAATCCATGACTTGGAAGCCCAAAGGTTTGTAGGAAAGTGTTTGGCAAATGTCTCAGAGAGGTTGTCAGCGAAGGAGCTATTATTGGACCCATTTTTAGCCAAGGACCAACTAGACTCTCCACTGGCTAGCCCAACATTGCCCAGAAAACAAACCCCCACTCTCAATTTCACTGCTTCACTTGCCAAAGAGCTACTACCTCCACCAAAAAAGAGTAACCAAACACACATGACAATCACTGGATCAATGAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAAGTGGGCAAAAAAGAAACATATTCTTTCCATTTGACACCATAAACGACACTGCCATTGATGTGGCAGTGGAGATGGTTAAAGAACTGGAGATTAGTGACTTGGAGCCATTGGAGATTGCTGAAATGATTGAGGAGGAGATATCAGCTTTGGTCCCAACTTGGAGAGATTGGGGCACTTCTAAGTATCAAAAACAGCATAGTTTTAGCTATGAAGAAGAGTATGATCATATGAGTAACCACCACCCTTTCTTCTCACCATCTTCTCGCTCTTCCTCTCATACTTCTCTTCCGGTGTTTAGTTCTTCCTACAAGAATAATTCACACCATCATGAACAATTTATGAATGATGATGCTAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGTTTCAACTTCAATTGCTGCGGCGACCCTGGCAATGAAGATGAGCATGATCCAACTCTAGCAGTAGGAGCAGAACCTCTTTGCCACACTCCAAAAGGCAATGAAAAGTGCACAAGATTCTGTCCTAGAGAAGAAGTCATGGATGCAGGTTTCACCAAACAGTTTTGCAACATGAGAATGGATTCTCACAGCAGCAGGTGTCATGGAGTGCACAGGCTAACAAGGATCAGTTCCTTTGTGGACCTGAGGAGACAGCAATTGCATAGATCACTGATGGAGGAGATTCACAAGAGGAGGATGTTCAAGACTGTTGGTGCTGTTGAGAACATTGGGTTTCAGAATCCAGAAGGAAGTGGATGTTTTTCTTATTGA 1746 0.433 MLKLILLVDMDVDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDLLPRLYSEVHLLKNLEHDSIMTFHDSWIDVNCRTFNFITELFTSGTLREYRKKYQRVDVRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILRGSQHAHSTPEFMAPELYEEEYNELVDIYSFGMCMIEIFTSEFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQRFVGKCLANVSERLSAKELLLDPFLAKDQLDSPLASPTLPRKQTPTLNFTASLAKELLPPPKKSNQTHMTITGSMNEEDDTVFLKVQISNKSGQKRNIFFPFDTINDTAIDVAVEMVKELEISDLEPLEIAEMIEEEISALVPTWRDWGTSKYQKQHSFSYEEEYDHMSNHHPFFSPSSRSSSHTSLPVFSSSYKNNSHHHEQFMNDDASSQSSMNSFKCFNFNCCGDPGNEDEHDPTLAVGAEPLCHTPKGNEKCTRFCPREEVMDAGFTKQFCNMRMDSHSSRCHGVHRLTRISSFVDLRRQQLHRSLMEEIHKRRMFKTVGAVENIGFQNPEGSGCFSY 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0984 581 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0984 581 Gene3D Transferase(Phosphotransferase) domain 1 92 270 - -
Aed2g0984 581 Pfam Protein kinase domain 12 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0984 581 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0984 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Aed2g0984 581 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 13 573 - -
Aed2g0984 581 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 573 - -
Aed2g0984 581 Gene3D Phosphorylase Kinase; domain 1 10 90 - -
Aed2g0984 581 SUPERFAMILY Protein kinase-like (PK-like) 12 265 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0984 Aed-Chr2 7748536 7754896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0984 13 406 MAP Kinase Kinase Kinase AT3G51630 66.500 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed2g0984 Pkinase 4.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0984 K08867 - gmx:100816187 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0984 2 7748536 7754896 Aed2g0984 2 7748536 7754896 ECH
Aed3g0884 3 6438376 6441486 Aed2g0984 2 7748536 7754896 PCT