Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0970 ATGGAGTCAAGGAGCTGCTGCATGAACGTGGCGTGCGCCACCTCGACCACGATTCGGTGGCGCAAAGGCTGGACCCTGCGATCCGGCGAAATCGCCGATCTCTGCGATAAGTGCGGTTCTGCTTATGAGCAATCAACATATTGTGATATGTTTCACTCAAATGATTCTGGTTGGAGAGAATGCACTTCATGTGACAAGCGTCTCCATTGCGGATGCATTGCTTCTATGTCTCAGCTTGAATTATTAGATACTGGTGGTGTAAGCTGTATAAGCTGTGCAAGGAATATAGGACTGCAACCTATTGCAAGCAATGAAAAACCGAGTGGATCTGGGACACCAAAAGTACAAAATGTCAGTACACAGCAGTGCACATCTCTGGCTAACCAATTAACTGTGAGGGCTATGCAAGTAAGGCATTTTGCAGAGAATGATGGACTTCGGTCCTGGTTCAAACCTCATAATGTTGAAACAGATGGGCCTTCTACAGAAATGAAACCAGAAATTTTACCTTCAGTTGGAGAACTTGGAAACACTTTGATATCACAATTTCATTGTGAGTCTAATGGGTCATCTAAGGCTTCCAAAGCAGAGAATTGTAAGACAGACACAGAGATGCGAGATATATATGAATCATTGGCCCAGACAAATTTGAGTATGGCCCTTTCTGCTCCTTTAGGAAATTCAAGTCCCTTTCATAGTGCTGTTGTTGATGAAGGGGAACAAAGTAAAACACCTCCACTTTTATTGGGGCCAAGGTCTCGCCATCTTTTACCTAAGCCCCCTAGGTCAACTATTGGGACAAGCTTAGAAGCAAATGCTAGCATGGTATCCCAGATTCGTGTAGCAAGGCCACCTGCTGAAGGACGGGGAAGGAATCAATTGCTTCCACGTTATTGGCCTAGGATTACTGATCAAGAGTTGCAACAAATATCAGGAGAGTATCCATCAATTATTTCCTTAACCGTGATTCGTGATTCAAGTTCAAATTCTACGATCGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTTTACCAAAAGCATGTGCTGAAGCATATTTCCCTCCAATCTCTCAACCAGAGGGCCTTCCTTTAAGAATCCAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAACCCCCTGCATTCAGTCCATGCAATTGCAAGCTGGAGATACTGTAACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTTAGAAAGGCAACAAATTCTACTGCAGTACAGGAAACACTACCATCTAATATGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATCTACCTATATTAAGTGGTTACTCTGGCCTTCTTCAGTCACAAAAGGGATGTTCAGAAACCCACCTAAATGCGCTGTCTAAAAAATGGAACTCAGCTGGTGGTGACATGAATTGGCATAACATTGACATGCCTGAAAGCAGAAAAAGAGAGGGGTTGCCGTTGCCACCTGTGCTGGTTCCTGAGAAGAAAAGAACTCGGAATATTGGATCAAAAAGTAAGAGGTTGCTTATTGATAGCCAGGATGCACTGGAGCTGAAACTTACATGGGAAGAGGCTCAGGATTTGCTCCGTCCACCTCCAACTGTTAAGCCAAGTATTGTCATGATTGAGGATCATGTATTTGAAGAATATGAAGAACCTCCCGTCTTTGGGAAGAGGAGTATATTCGTAGTTCGATCAACTGGGGTAAATGAGCAGTGGACGCAGTGTGATAGTTGCTCAAAATGGCGAAAGTTGCCAGTTGATGTACTTATTCCCCCAAAGTGGACATGTGTGGAGAATTTATGGGATCAGAGCAGGTGTTCATGTTCTACTCCTAATGAATTGAACCCAAGGGAACTGGATAATCTTCTGAGACTGAATAAAGAATTCAAGAAACAAAGAGTGGCTGCAAGCCAGAGACCGGCCCTGGAACATGAATCTTCAGGACTGGATGCTTTGGCAAATGCAGCAATACTGGGAGATGATGCAAGTGACTCTGGCAGGACACCGGTTGTTACCACCACAAAACATCCTCGGCATAGACCTGGGTGCTCCTGCATTGTCTGTATCCAGCCTCCAAGTGGGAAGGGCAAACACAAACCTACTTGCACCTGCAATGTGTGCATGACAGTTAAGCGACGGTTTAAAACCCTGATGATGAGAAAGAAGAAGCGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATCAGTTATCATGGCGGCCCAAGGATGAATCAGAAGTAGATAGCACCTCACAACATTTAACTCCAGTTGAAGGTTTGGAGAATGAATCAAGGGTGGTTCAAAATGAATTGGATTCAAGAAGTGAAGACCATGTGGTGGCTGAAGCTGCCAAGGGACAGTTAGACTTGAATTGCCAACCTGATCGAGAAGATGCTCAAGCTGGGGCGAACAGTGTGAGCATGACGACTCTTCTTGAAGAAGCGAATCTCCCGCTGAATACCTACCTGAAGCAAAATGGTCTTACTAGCTTGGCATCAGAGCAGCAAACAAATTCAGCTTCAAATGTGCAGCCACAAACAACAAATGAGAGTGAGGGAAGACACAATGAGGATTGCGGAACCGCTTCAGTTATTCATGAGCAGGAAAGCAGTCCCGAAGACAACAGTGGGCAAGAGAAAGAGCAGAACAATTCAGTCTCATGA 2772 0.4426 MESRSCCMNVACATSTTIRWRKGWTLRSGEIADLCDKCGSAYEQSTYCDMFHSNDSGWRECTSCDKRLHCGCIASMSQLELLDTGGVSCISCARNIGLQPIASNEKPSGSGTPKVQNVSTQQCTSLANQLTVRAMQVRHFAENDGLRSWFKPHNVETDGPSTEMKPEILPSVGELGNTLISQFHCESNGSSKASKAENCKTDTEMRDIYESLAQTNLSMALSAPLGNSSPFHSAVVDEGEQSKTPPLLLGPRSRHLLPKPPRSTIGTSLEANASMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGEYPSIISLTVIRDSSSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSTAVQETLPSNMPNGSHSSETSYSGVYENLPILSGYSGLLQSQKGCSETHLNALSKKWNSAGGDMNWHNIDMPESRKREGLPLPPVLVPEKKRTRNIGSKSKRLLIDSQDALELKLTWEEAQDLLRPPPTVKPSIVMIEDHVFEEYEEPPVFGKRSIFVVRSTGVNEQWTQCDSCSKWRKLPVDVLIPPKWTCVENLWDQSRCSCSTPNELNPRELDNLLRLNKEFKKQRVAASQRPALEHESSGLDALANAAILGDDASDSGRTPVVTTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQLSWRPKDESEVDSTSQHLTPVEGLENESRVVQNELDSRSEDHVVAEAAKGQLDLNCQPDREDAQAGANSVSMTTLLEEANLPLNTYLKQNGLTSLASEQQTNSASNVQPQTTNESEGRHNEDCGTASVIHEQESSPEDNSGQEKEQNNSVS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0970 923 CDD B3_DNA 334 435 IPR003340 GO:0003677
Aed2g0970 923 Gene3D - 604 660 - -
Aed2g0970 923 ProSiteProfiles B3 DNA-binding domain profile. 336 437 IPR003340 GO:0003677
Aed2g0970 923 MobiDBLite consensus disorder prediction 755 800 - -
Aed2g0970 923 Pfam CW-type Zinc Finger 606 648 IPR011124 GO:0008270
Aed2g0970 923 MobiDBLite consensus disorder prediction 869 886 - -
Aed2g0970 923 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 6 875 - -
Aed2g0970 923 SUPERFAMILY DNA-binding pseudobarrel domain 333 436 IPR015300 -
Aed2g0970 923 MobiDBLite consensus disorder prediction 869 923 - -
Aed2g0970 923 MobiDBLite consensus disorder prediction 899 923 - -
Aed2g0970 923 ProSiteProfiles Zinc finger CW-type profile. 601 651 IPR011124 GO:0008270
Aed2g0970 923 Gene3D - 300 441 IPR015300 -
Aed2g0970 923 MobiDBLite consensus disorder prediction 237 266 - -
Aed2g0970 923 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 6 875 - -
Aed2g0970 923 Pfam B3 DNA binding domain 336 435 IPR003340 GO:0003677
Aed2g0970 923 SMART B3_2 336 436 IPR003340 GO:0003677
Aed2g0970 923 Coils Coil 654 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0970 Aed-Chr2 7646033 7655285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0970 1 892 B3 DNA Binding Superfamily AT4G32010 49.007 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aed2g0970 B3 1.5e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0970 - - gmx:100778833 1708.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0970 2 7646033 7655285 Aed2g0970 2 7646033 7655285 ECH