Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0961 ATGGAATGGTACAGGAATCTTTCTCACAACAAGCTTATTGGTGCAATCCCTTCAGCCATTGCAAACCTAACCAATCTTCAGTATGCAGATTTCTCATGGAATGAACTGTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCAACCTTTTCTCATTCAATGTTTCAAACAACCACCTTCAAGGTGAGTTACCAGTGGGTGGTTTCTTCAATACCATATCTCCTTCATCTGTCTCTGGTAATCCATTGTTCTGTGGTTCAGTTGTTAATCACTCTTGCCCTTCTGTTCATCCAAAGCCTATTGTCCTTAACCCTAATTCTTCTTACTCCAACTCTGGCTCTTCCTTACAAAACCACCATCATAAGATGATGCTGAGTATCTCTGTCATTATTGCCATTGGTGCTGCTATTTTCATTGTCATTGGTGTGTTGGTTGTTGCTGTCCTTAATGTCCATACAAGGTCTTCAATGTTACCTAATGCTGCTCCATTTGTGTTCTCTGGTGGTGACGACTATAGCGGTTCACCTGAGAATGATCCAAACTATGGCAAGCTTGTGATGTTCTCTGGTGAAGCTGAGTTTGCTGATGGTGCTCACAATCTTCTTAACAAAGACAATGAAATAGGCCGTGGAGGATTTGGAGTTGTGTATTGCACTGTCCTTAGAGATGGCCATTGTGTTGCAATCAAGAAGCTCACAGTGTCCACTTTAACCAAATCTCAAGAAGACTTTGAGAGGGAGGTTAAAATGCTTGGGGAGATCAAATTCAAGCATCAAAATCTTGTGGCACTTGAAGAGGAAGCAATTCCTGTGATGAAATTGGGGTTGGTTTGTGCTTCACAGGTGCCTTCAAATCGCCCTGATATGGCTGAGATTGAGACATACATAACAGATGTTTTACATTACCTGGTGAAGAACAATCCATTTAGAAGTGAAACTCTAATGTATATTTCTGGTTTAATAAACATTGACTATACAGATATTTAA 987 0.4053 MEWYRNLSHNKLIGAIPSAIANLTNLQYADFSWNELSGSLPKELTNLSNLFSFNVSNNHLQGELPVGGFFNTISPSSVSGNPLFCGSVVNHSCPSVHPKPIVLNPNSSYSNSGSSLQNHHHKMMLSISVIIAIGAAIFIVIGVLVVAVLNVHTRSSMLPNAAPFVFSGGDDYSGSPENDPNYGKLVMFSGEAEFADGAHNLLNKDNEIGRGGFGVVYCTVLRDGHCVAIKKLTVSTLTKSQEDFEREVKMLGEIKFKHQNLVALEEEAIPVMKLGLVCASQVPSNRPDMAEIETYITDVLHYLVKNNPFRSETLMYISGLINIDYTDI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0961 328 Gene3D Phosphorylase Kinase; domain 1 180 271 - -
Aed2g0961 328 ProSitePatterns Protein kinases ATP-binding region signature. 208 231 IPR017441 GO:0005524
Aed2g0961 328 Gene3D Ribonuclease Inhibitor 3 99 IPR032675 -
Aed2g0961 328 SUPERFAMILY Protein kinase-like (PK-like) 200 265 IPR011009 -
Aed2g0961 328 SUPERFAMILY L domain-like 6 71 - -
Aed2g0961 328 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 266 296 - -
Aed2g0961 328 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 265 - -
Aed2g0961 328 ProSiteProfiles Protein kinase domain profile. 202 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0961 328 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 266 296 - -
Aed2g0961 328 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 265 - -
Aed2g0961 328 Pfam Protein tyrosine and serine/threonine kinase 203 264 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0961 Aed-Chr2 7572889 7574924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0961 6 69 Receptor kinase-like Gene Family AT3G56370 43.750 1.03e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Aed2g0961 PK_Tyr_Ser-Thr 7.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0961 - - gmx:100812508 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0961 2 7572889 7574924 Aed2g0961 2 7572889 7574924 ECH
Aed9g2124 9 24433640 24434618 Aed2g0961 2 7572889 7574924 PCT