Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0950 ATGTCTTCTGTATCTGATACCGTTACCGATCCCACCACTCCCAATGAAAACAAGAACCAAACCCTGACTGAAGAACCCGTCATTGCCAACAACGAAAGCGATTCCAATCTGAAACCCCTCGACCAAGATGGGGTTTCGGAGAAGAAGGACGCGGAGTACTACAGGAAGCGCAGGGAAAGTATATTAATGGAAAATAACTATGTGGGTGGCGTAAGAAGAAGCGCCAGACTTCGGAAAATCCAATCGGGTGATGTTTCTCGTTCGGATGGCACCTCTCAGGATGCATTACCGAAGCTCATGGAAGGAGAAAGCAGAGGTAAATACATGGAAAGTAATGATGATTCAAAGCCACAGGAACTTTCAGAACATCCGCAAATTGAGACTTTTCGTTGCAAAACTTGCAACGTTACTTGTTTTTCAAAAAGTGGCTACAATACCCATTTGCAAGGGAGAAAGCACTTGAAGAATGTAAGGCGTCGCCAAGTTTTGTTAGGAGCAGGTCAGCAAGCTGTGTCTGGGGGACGCTTGGGGCTTCAAGCACTTTACCCACCTGAAAACAATGCTCTGTCTAATGCAACTAATGCTCAAGTCCAACAGCATGATAATAATCCACTGGATCTTTCAGAACCTGTGCAAATTGAGCCTTTTAGATGTGATCTGTGTGATGTTAAATGTCCGTCACAAGTCGTTTTGAAGAGTCATATGTCTGGGAAAAAGCACTATTTAAACCTAAGGCGTTCTCTTGAGATCGAAGCTTCATTTGGAGTAGGCCAGCAACAAGCTTCGTCTGGAGCACCCTTAGGGCTTCCATCACTTAACCAACAAGCTTCGTCTGGAGCACCCTTTGGGCTTCCATCACTTAACCAACAAGCCCTATCTGGAGCACCCCTAGGGCTTCCATCACTTAACCAACAGGCTCCATCTGGAACACCCCTAGGGCTTCCATCACTTAACCAACAAGCTCCGTCTGGAACACCCCTAGGGATTCCATCACTTAACCCACCTGACATCCATGCTCTGTCTAATGCAATTAATGCACAAGTCCAACGAGGTGATAATGATCCCCAGGTACTTTTGGCTCAGCTCCTGATGACTCTAATATGTCAAGCACAAATCCCAGCAACAGCACCAGTGACGGGTGCCATGGCTACTCAGCTACCAGCACCCACATTTATGGCTGGACCAAGTTATGACCCCCAGTTGTTACAGACAAATCCTTATGGGGAAACAAAATCTGAGCTGCTGCCTGGTTCAAGTTTCAGCACCCAAATTGAAGGAGGGAAAGGGGGTAAATACATGAGAACTAGTGATGGCTCAAAGCCAGTGAAACCTGCACAAGCTTTGCCTTTTAGACGTAAGTCACAAGTTGATTACCGGAGTCATGTGACTGGGAAAAGGCACTTAATAAATCAACATCGTGCTCGGCAGGAAGCCCGGCGGGAAGCATGGCTTTCTGCTCGGCATCCTCATGGTGCTTGGCAGAAAGCTCGGCATGCTCATTGTGCTCGGCAGCAAGATCGGCGCGCTCATTGTGCTCACCAAGCTCAGCGTGCTCATGACATGCAAGCTTCATCTGGAGTAGGCCAGCAACAAGCTCAGTGTGAAAACAATGCTCTGTCTAATGCAACTTATGCTCAAGTTCAACAAGGTGATAATAATCAACAGGTACTTTCAAAACCTGCAAAGATTCAGCATAAAAAAAAAAAACCTGCAAAGAATGGGCCTTATCATTGCAAGAGTTGCAATTGGGAATGTAACAAACAGAGTGATTATCTAAGACATTTGAATGGAAGATATCACCATCGTCAACGAAGGATTGGTCGGTTGCATCGTCAACCAGTTGTGTCTGGAGAATTCTTGGGGTTTCGAAGCCGACCTGACATCAATGCCCTGTCTAATGCAGTTAATGCTAAAGTCAAACAAGGTTTTAGTAACAAGAATCCACAGGTCCGTCTGGGTCAGCTCATGATGACAGTACTATCTAAAACACCAGCTAAAGCAACAGCACCGGTGGCAGGTGCTATGGTGGCTGAGATACCCACATCCACCACATCTATGACTGGATCAACCCCAGTTGTTGCAGCCACAAGCATCAGAAATCACAACACTGTTGAGATGGAAAATCCTTCTGGGGAAACATAA 2142 0.4622 MSSVSDTVTDPTTPNENKNQTLTEEPVIANNESDSNLKPLDQDGVSEKKDAEYYRKRRESILMENNYVGGVRRSARLRKIQSGDVSRSDGTSQDALPKLMEGESRGKYMESNDDSKPQELSEHPQIETFRCKTCNVTCFSKSGYNTHLQGRKHLKNVRRRQVLLGAGQQAVSGGRLGLQALYPPENNALSNATNAQVQQHDNNPLDLSEPVQIEPFRCDLCDVKCPSQVVLKSHMSGKKHYLNLRRSLEIEASFGVGQQQASSGAPLGLPSLNQQASSGAPFGLPSLNQQALSGAPLGLPSLNQQAPSGTPLGLPSLNQQAPSGTPLGIPSLNPPDIHALSNAINAQVQRGDNDPQVLLAQLLMTLICQAQIPATAPVTGAMATQLPAPTFMAGPSYDPQLLQTNPYGETKSELLPGSSFSTQIEGGKGGKYMRTSDGSKPVKPAQALPFRRKSQVDYRSHVTGKRHLINQHRARQEARREAWLSARHPHGAWQKARHAHCARQQDRRAHCAHQAQRAHDMQASSGVGQQQAQCENNALSNATYAQVQQGDNNQQVLSKPAKIQHKKKKPAKNGPYHCKSCNWECNKQSDYLRHLNGRYHHRQRRIGRLHRQPVVSGEFLGFRSRPDINALSNAVNAKVKQGFSNKNPQVRLGQLMMTVLSKTPAKATAPVAGAMVAEIPTSTTSMTGSTPVVAATSIRNHNTVEMENPSGET 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0950 713 MobiDBLite consensus disorder prediction 1 40 - -
Aed2g0950 713 MobiDBLite consensus disorder prediction 79 124 - -
Aed2g0950 713 SMART c2h2final6 216 240 IPR013087 -
Aed2g0950 713 SMART c2h2final6 129 153 IPR013087 -
Aed2g0950 713 SMART c2h2final6 576 600 IPR013087 -
Aed2g0950 713 MobiDBLite consensus disorder prediction 261 324 - -
Aed2g0950 713 SMART ZnF_U1_5 126 160 IPR003604 GO:0003676|GO:0008270
Aed2g0950 713 SMART ZnF_U1_5 213 247 IPR003604 GO:0003676|GO:0008270
Aed2g0950 713 SMART ZnF_U1_5 573 609 IPR003604 GO:0003676|GO:0008270
Aed2g0950 713 Gene3D Classic Zinc Finger 195 247 - -
Aed2g0950 713 Gene3D Classic Zinc Finger 109 161 - -
Aed2g0950 713 ProSitePatterns Zinc finger C2H2 type domain signature. 131 153 IPR013087 -
Aed2g0950 713 ProSitePatterns Zinc finger C2H2 type domain signature. 578 600 IPR013087 -
Aed2g0950 713 PANTHER OS06G0651300 PROTEIN-RELATED 204 265 - -
Aed2g0950 713 PANTHER OS06G0651300 PROTEIN-RELATED 99 192 - -
Aed2g0950 713 SUPERFAMILY beta-beta-alpha zinc fingers 568 604 IPR036236 -
Aed2g0950 713 SUPERFAMILY beta-beta-alpha zinc fingers 208 246 IPR036236 -
Aed2g0950 713 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 99 192 - -
Aed2g0950 713 MobiDBLite consensus disorder prediction 100 124 - -
Aed2g0950 713 MobiDBLite consensus disorder prediction 1 51 - -
Aed2g0950 713 MobiDBLite consensus disorder prediction 410 425 - -
Aed2g0950 713 PANTHER OS06G0651300 PROTEIN-RELATED 423 477 - -
Aed2g0950 713 Pfam Zinc-finger of C2H2 type 216 240 - -
Aed2g0950 713 Pfam Zinc-finger of C2H2 type 129 153 - -
Aed2g0950 713 SUPERFAMILY beta-beta-alpha zinc fingers 123 161 IPR036236 -
Aed2g0950 713 MobiDBLite consensus disorder prediction 410 445 - -
Aed2g0950 713 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 423 477 - -
Aed2g0950 713 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 204 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0950 Aed-Chr2 7455271 7459252 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed2g0950 zf-met 8e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0950 - - vra:106780092 169.859