Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0937 ATGAAGGCCATGCCCTTTCCTTTTGAGGAGTTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCATCCTCAGATTCATTCTCAGTGCTTTTGCATCATCCACAACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTACTACGTGGGCAGCACTGAGCCCACATCGGTTCTTGACACCAGAAGAAGCCCAAACTCTTCAACCATGTCCTCTTCCCTTGGCAGCAGCAACACCATAAGCAAGGGTGGTAGTGGTGGCGGAGGCGGCGGCGGCTCAACCATTAACAACAACAACACCACCACTTGTTGTTACACTCCAACAACAACGGTTTCTCAGAACCACCCTTCTCAGGCAACATTGGAAACTTCTTCCCCAGAAAAATGTGGTGGTGTGAGAATGGAGGATTTGGAGGGTCAAGATCAATCCATTCTGAGACTAATCATGGGAGATGCTGAAGACCCTTCTGCAGGGTTGAGCAAGCTCTTCCAAGGAAGTGGTAGTGTTGATTTCAATGCAGGTTTTGGTGTTGTGGATCAGGGTTTGAATATGAATATGAACATGAATATGGTAAGTGTTGTTGACCACCCTTCAGGGAATTACCACCCTAGTTTCCCTTTTATTGCTGAGAGTAATATAGTAGATGGACACAATGGTGGTGGTAGTAATAACAACAAGACTGGTTCTTTGTCTGTTGGAGAATCTATGTTTTCTGTTTCTGGTGGTAACAGTCATTTGTTGTTGTCAACATCTGGTGGGTTTAATTCTCAGCAGCAAGTGATTGGAGAGGTGGATGAGAAGCCTCAAGTCATCAACACCTCACAGTTTGTGTTGAACCAGAACCAAGTTCAGTTCTCGGAGAACCCCTTTTTCTTTGTGCCAATGATGTATCCCCAATCGCAGGAGCAGCAACAAGTTTTCTCCCATCAGCATCAAGCGAAACAACAACGCCCGGTTTTCGAACCTGTCGGACACAGCAATTTTCAGGCTCCAAGGTTGCCCCTTTTGGACTCGGGGCAGCAAGAGGGGTTTGGTGGTAGGACTAGGCAGCAGCAAACAACACAGCTTCCTTTGTTTCCTCACCATATGCATATGCCACCGCAGGTTGCGCCATCTGCTGTTTCCAAACAGCAGAAGGCGAGTTCCACCACCGCCGGAGAAGACGCAAGCCACCAGCTTCAGCAGGCTATGTTCGACCAGCTATACAAAACCGCGGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATCGGTAAGCCCTTCCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCGAATGTTCACAATGTCTTGGCCTTCTCACCGATTAGTTCCATTTTCAAAATTGGAGCATACAAGTCCTTTTCCGAGATATCACCCGTTGTTCAGTTCGCCAACTTCACTAGCAATCAAGCTATCATCGAAGCTGTGGAAAGGTTCGATCGAATCCACATCATCGATTTTGATATCGGCCTTGGCGTGCAATGGTCTTCTCTTATGCAGGTCCTCGCCCTGAGGAGCAACGGGGGTGTGCCTTCACTCAAGGTCACCGCCATTGTGTCACCCCTCACTTGTGATGAGTTTGAGCTCAACATCACTCAAGAGAAGTTGAGCCATTTCGCGAAAGACCTCAACATGGCTTTCGAGTTCAATGTCTTAAGCATCGAGTCGTTGAACACTCCTTCGTGTCCACTCTCCGTTCAGTTCTATGATAATGAGGCAATTGCTGTGTACATGCCACTCTCTTGTTTCACAATCTGCCCAACATTGTTTCCCTTGGTCCTCCGCTTTGTGAAGCAGCTTAGGCCGAAAGTGGTGGTCACTCTCGACCGGAATTGCGACAGAATTGACGCTCCATTTTCCACCAATGTAGTCCATGCTCTTCACTGCTACTCGGCCTTGCTCGAATCACTAGATGCCGTTAATGTGAACCTAGATGTCCTACAGAAGATCGAGAAGCATTTCATCCTTCCAGCTATCAAGAGGATCATAATAGGTCCCCCGCACCGTTCGCCAGAAAAGTTACCAACTTGGAGGAACATGTTTATGCAATATGGCTTCTCTCCATTCACATTCAGCAACTTCACAGAAGCTCAAGCTGAGTGTTTAGTGCAGAAGGCACCTGTGAGGGGATTTCAATTGGAGAGAAAGCACTCATCTCTTGCTCTATGCTGGCAGAGGAAAGAACTCATCACAGTTTCAACTTGGAGATGCTGA 2271 0.4764 MKAMPFPFEEFQGKGVLDFSSSSDSFSVLLHHPQQPKWTIDKEDYCYYVGSTEPTSVLDTRRSPNSSTMSSSLGSSNTISKGGSGGGGGGGSTINNNNTTTCCYTPTTTVSQNHPSQATLETSSPEKCGGVRMEDLEGQDQSILRLIMGDAEDPSAGLSKLFQGSGSVDFNAGFGVVDQGLNMNMNMNMVSVVDHPSGNYHPSFPFIAESNIVDGHNGGGSNNNKTGSLSVGESMFSVSGGNSHLLLSTSGGFNSQQQVIGEVDEKPQVINTSQFVLNQNQVQFSENPFFFVPMMYPQSQEQQQVFSHQHQAKQQRPVFEPVGHSNFQAPRLPLLDSGQQEGFGGRTRQQQTTQLPLFPHHMHMPPQVAPSAVSKQQKASSTTAGEDASHQLQQAMFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNVHNVLAFSPISSIFKIGAYKSFSEISPVVQFANFTSNQAIIEAVERFDRIHIIDFDIGLGVQWSSLMQVLALRSNGGVPSLKVTAIVSPLTCDEFELNITQEKLSHFAKDLNMAFEFNVLSIESLNTPSCPLSVQFYDNEAIAVYMPLSCFTICPTLFPLVLRFVKQLRPKVVVTLDRNCDRIDAPFSTNVVHALHCYSALLESLDAVNVNLDVLQKIEKHFILPAIKRIIIGPPHRSPEKLPTWRNMFMQYGFSPFTFSNFTEAQAECLVQKAPVRGFQLERKHSSLALCWQRKELITVSTWRC 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0937 756 MobiDBLite consensus disorder prediction 56 93 - -
Aed2g0937 756 ProSiteProfiles GRAS family profile. 387 755 IPR005202 -
Aed2g0937 756 MobiDBLite consensus disorder prediction 360 389 - -
Aed2g0937 756 MobiDBLite consensus disorder prediction 108 124 - -
Aed2g0937 756 MobiDBLite consensus disorder prediction 108 127 - -
Aed2g0937 756 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 755 - -
Aed2g0937 756 MobiDBLite consensus disorder prediction 370 389 - -
Aed2g0937 756 Pfam GRAS domain family 398 755 IPR005202 -
Aed2g0937 756 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 755 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0937 Aed-Chr2 7341925 7344195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0937 398 756 GRAS Transcription Factor Family AT4G00150 55.556 1.49e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed2g0937 GRAS 1.5e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0937 - - gmx:100801785 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0937 2 7341925 7344195 Aed2g0937 2 7341925 7344195 ECH
Aed9g1493 9 17779913 17782186 Aed2g0937 2 7341925 7344195 PCT