Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0912 ATGACCATGCAATTCAGACTCGGCAAGCGCGTTGTAAAGGTTGCAAAATGGGTCTTCCGTCGGGTTAGGATCCGTACCCGACCCGGATACAGCCGTCTCGGGTCAACCCCTTCGAGGAAAAGTCCCATATCAAAGCTTCTCACGTGGGGGCAAAAATTGAAGAGAGGAGCGGAGACCCTCTGCGGGAAAAGCGGGTCGGTCTACCTCCCAATCGGGTCGGATCCGGTTTGTGACAGGGCTACCGCAGTGCCGAAGGGGCACTTGGCGGTGTACGTGGGGGAGGAGGACGGCGAGTTCCGCCGTGTGTTGATTCCGGTGATCTACTTCAACCACCCATTGTTCAGTGGTTTGCTGAGGGAAGCGGAAAAAGAGTTCGGGTTTGAACACCCCGGCGGGATCACGATACCGTGCCGGCTCACCGAGTTTGAACAGGTCAAGACCCGGATCGCATCCGGGTCGGGCCTTCGCGCGAGGACCCGGCGATTGGGGTGGCGGCTATAA 501 0.5868 MTMQFRLGKRVVKVAKWVFRRVRIRTRPGYSRLGSTPSRKSPISKLLTWGQKLKRGAETLCGKSGSVYLPIGSDPVCDRATAVPKGHLAVYVGEEDGEFRRVLIPVIYFNHPLFSGLLREAEKEFGFEHPGGITIPCRLTEFEQVKTRIASGSGLRARTRRLGWRL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0912 166 Pfam Auxin responsive protein 78 146 IPR003676 GO:0009733
Aed2g0912 166 PANTHER SMALL AUXIN-UP RNA-RELATED 4 159 - -
Aed2g0912 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 159 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0912 Aed-Chr2 7090690 7091190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0912 83 142 Calmodulin-binding Proteins AT3G43120 53.333 2.07e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0912 K14488 - gmx:100808164 287.345