Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0910 ATGGCACCATCATCTCCTCTCCTAATAACCCTTCTATTTGCACCCTTTCTATTATCCTCCATTGTTCTCTCTTACTCATTCAAAGACATTCAATCATGGTGCAACCAAACCCCCTACCCTCAACCATGTGAGTACTACTTGACCAACCATGCCTTCAACAAACCAATCAAAACCAAAACCGATTTCCTCAAAGTTTCACTCCAGCTAGCCCTAGAGAGAGCACAAAGGAGTGAACTCAACACCCATGCCCTAGGCCCAAAGTGCCGCAATGTCCATGAAAAAGCAGCATGGCAAGATTGCCTTGAACTCTACCAGCACACCATCCTAAGACTCAACAAAACCATCGACCCTAACACCAAATGCACGCAATCCGACACACAATCATGGCTCAGCACAGCCCTAACAAACCTTGAAACATGCAAAACAGGATTCTATGAGCTTGGTGTCACGGATTACGTTCTACCCTTGATGTCAAATAATGTCACAAAGTTACTAAGCAACACACTCTCTCTCAACAAGGGCTATTCTAACCAATACAAGCCACCAAGTTATAAAGAAGGGTTTCCAACATGGGTGAAGCCAGGTGATAGAAAATTATTGCAATCTTCTTCAGCTGCTTCTAATGCTAATGTGGTGGTTGCAAAAGATGGTTCTGGCAAATACACATCCGTTAAAGCTGCTGTTGATGCTGCTCCAAAGAGTAGTAGTGGAAGGTATGTGATACATGTGAAGGGAGGGACATACAATGAACAAGTTGAGGTGAAAGCAAAGAATATAATGTTGGTTGGAGATGGTATTGGAAAGACTATAATCACAGGTAGCAAAAGCGTTGGAGGAGGCACCACAACCTTTCGTTCAGCCACTGTTGCTGCTGTGGGTGATGGATTCATTGCTCAAGACATAACATTCAGGAACACAGCAGGAGCAGCAAACCACCAAGCAGTGGCATTCCGATCAGGCTCAGACCTCTCAGTGTTCTACAGATGCAGCTTCGAGGGTTACCAAGACACACTCTATGTTCACTCAGAGAGACAGTTTTATCGAGAATGTGATATCTATGGCACCGTTGACTTCATCTTCGGCAACGCCGCCGCCGTCTTGCAAAACTGCAACATCTACGCAAGAGCCCCTCCTCAGAAAACCATCACAGTCACAGCACAAGGCAGAACAGACCCTAACCAGAACACCGGCATCATCATCCACAACTCCAAGGTCACCGGAGCCTCGGGGTTCAACCCTAGTTCAGTTAAGTCATACCTAGGAAGGCCATGGCAAAAGTACTCAAGAACAGTGTTCATGAAAACCTATCTTGACTCATTGATCAACCCTAGTGGTTGGTTGGAATGGGATGGTAACTTTGCCCTAGACACTTTGTACTATGCTGAATATGCCAACACTGGCCCTGGCTCAAGCACTGCCAATAGGGTTTCTTGGAAGGGTTACCATGTTCTCACTAGTGCCTCTCAGGCCTCCGATTTCACTGTTGGGAACTTCATTGCTGGTGGCAATTGGATACCTAGTGGTGTTCCTTTCACCTCAGGGCTTTGA 1548 0.4599 MAPSSPLLITLLFAPFLLSSIVLSYSFKDIQSWCNQTPYPQPCEYYLTNHAFNKPIKTKTDFLKVSLQLALERAQRSELNTHALGPKCRNVHEKAAWQDCLELYQHTILRLNKTIDPNTKCTQSDTQSWLSTALTNLETCKTGFYELGVTDYVLPLMSNNVTKLLSNTLSLNKGYSNQYKPPSYKEGFPTWVKPGDRKLLQSSSAASNANVVVAKDGSGKYTSVKAAVDAAPKSSSGRYVIHVKGGTYNEQVEVKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAAVGDGFIAQDITFRNTAGAANHQAVAFRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAAVLQNCNIYARAPPQKTITVTAQGRTDPNQNTGIIIHNSKVTGASGFNPSSVKSYLGRPWQKYSRTVFMKTYLDSLINPSGWLEWDGNFALDTLYYAEYANTGPGSSTANRVSWKGYHVLTSASQASDFTVGNFIAGGNWIPSGVPFTSGL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0910 515 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 174 IPR035513 -
Aed2g0910 515 ProSitePatterns Pectinesterase signature 1. 235 254 IPR018040 -
Aed2g0910 515 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 175 IPR006501 GO:0004857
Aed2g0910 515 SMART PMEI_2 25 171 IPR006501 GO:0004857
Aed2g0910 515 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 173 IPR035513 -
Aed2g0910 515 Pfam Pectinesterase 210 501 IPR000070 GO:0030599|GO:0042545
Aed2g0910 515 SUPERFAMILY Pectin lyase-like 204 507 IPR011050 -
Aed2g0910 515 Gene3D - 204 515 IPR012334 -
Aed2g0910 515 Pfam Plant invertase/pectin methylesterase inhibitor 29 171 IPR006501 GO:0004857
Aed2g0910 515 PANTHER PECTINESTERASE 5 514 - -
Aed2g0910 515 PANTHER PECTINESTERASE 5 514 - -
Aed2g0910 515 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Aed2g0910 515 CDD PMEI-like_3 32 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0910 Aed-Chr2 7076002 7080257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0910 8 515 Carbohydrate Esterase AT2G45220 68.039 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0910 K01051 - gmx:100782892 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0910 2 7076002 7080257 Aed2g0910 2 7076002 7080257 ECH