Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0909 ATGAAAGCTTTTCACTTTCTCCTAACCCTATTAATTCCTTTCATATTCTCCTCTTTCGTTTCAGGCTATTCTTGGAATGAGGTTAAACTTTGGTGCAACCAAACCCCAAACCCTAAACCATGTGAGTATTTCTTAACCAATAACCCCACTCACCAACACAAACCCCTCAAGCAAAAATCCGATTTCCTTAAACTCTCATTGCATCTTGCTCAAGAGAGAGCCCTCAAAGGCCATGCAAACACACTCTCACTAGCCTCGAAGTGCCGCAACCCACGAGAAAGAGTTGCTTTAGCCGATTGCATTGAGCTTTACAAACAAACCATTCTTAAACTCAACAAAACCCTAAACCGTAACCCTAACACCAAATTCTCTCAGGTTGACACCCAAACATGGCTCAGCACAGCTCTCACAAACCTTGAAACATGCAAAGCTGGGTTCTATGAGCTTGGAGTTCAAGACTATGTTCTCCCTCTAATGTCCAACAATGTCACTAAGTTGTTGAGCAACACCTTGTCACTTAACAAAGTTCAATATCAATATCAAGAACCAAGTTATAACAAAGAAGGGTTCCCAACATGGGTGAAGCCAAGTGATAGAAAGTTGTTGCAATCTTCTTCTTCTTCTTCAGCAGCTTCTAATGCTAATGTGGTTGTGGCCAAAGATGGTTCTGGAAAATACACAAGTGTGAGTGCAGCTGTTAATGCTGCTCCAAAGAGTAGTAGTGGAAGGTATGTGATATATGTGAAGGGAGGGATATACAATGAACAAGTTGAGATAAAAGCAAAGAATATAATGTTGGTTGGAGATGGTATTGGAAAGACTATAATCACAGGTAGCAAAAGTGTTGGAGGAGGCACCACAACTTTTCGTTCTGCCACTGTTGCTGTCGTTGGGGACAGATTTATTGCACAAGGAATCACATTCAGGAACACAGCTGGTGCAAAAAACCACCAAGCTGTAGCATTACGTTCTGGATCAGACTTATCAGTATTTTACAAATGCAGTTTTGAGGGTTACCAAGACACACTCTATGTCCACTCAGAGAGGCAATTCTACAGAGAGTGTAACATTTATGGCACTGTTGACTTCATATTCGGCAATGCTGCTGCTGTTTTGCAAAACTGCAACATATTTGCAAGAAACCCTCCCAACAAGGTCAACACCATCACTGCACAAGGCCGAACCGATCCGAACCAAAACACTGGAATTTCAATCCACAATTGTAGAGTCATGGCTGCATCGGATTTGAAACCGGTTCAGAATTCGGTTAGGACTTATCTTGGAAGACCATGGAAGGAATATTCAAGAACGGTTTTCATGAAGAGTTTTATTGATGGCTTGGTTAATCCAGAGGGGTGGATGGAATGGAGTGGTGAATTTGCATTGAAGACACTTTATTATGGAGAGTACATGAACACTGGTCCAGGTTCTTCCACTGCTAGAAGAGTTAAATGGCTAGGTTATCGTGTCATCACTAGGGCTTCCGAAGCATCAAAGTTCACAGTTGCAAATTTTGTTGCTGGAAATGCATGGTTACCTTCCACCAAAGTGCCTTTTACCTCTTCTTTGTAA 1572 0.4179 MKAFHFLLTLLIPFIFSSFVSGYSWNEVKLWCNQTPNPKPCEYFLTNNPTHQHKPLKQKSDFLKLSLHLAQERALKGHANTLSLASKCRNPRERVALADCIELYKQTILKLNKTLNRNPNTKFSQVDTQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLSLNKVQYQYQEPSYNKEGFPTWVKPSDRKLLQSSSSSSAASNANVVVAKDGSGKYTSVSAAVNAAPKSSSGRYVIYVKGGIYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDRFIAQGITFRNTAGAKNHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAAVLQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVMAASDLKPVQNSVRTYLGRPWKEYSRTVFMKSFIDGLVNPEGWMEWSGEFALKTLYYGEYMNTGPGSSTARRVKWLGYRVITRASEASKFTVANFVAGNAWLPSTKVPFTSSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0909 523 Gene3D - 209 523 IPR012334 -
Aed2g0909 523 Pfam Pectinesterase 215 509 IPR000070 GO:0030599|GO:0042545
Aed2g0909 523 CDD PMEI-like_3 30 175 - -
Aed2g0909 523 SMART PMEI_2 23 173 IPR006501 GO:0004857
Aed2g0909 523 ProSitePatterns Pectinesterase signature 2. 357 366 IPR033131 -
Aed2g0909 523 PANTHER PECTINESTERASE 5 522 - -
Aed2g0909 523 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Aed2g0909 523 SUPERFAMILY Pectin lyase-like 209 520 IPR011050 -
Aed2g0909 523 PANTHER PECTINESTERASE 5 522 - -
Aed2g0909 523 ProSitePatterns Pectinesterase signature 1. 240 259 IPR018040 -
Aed2g0909 523 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 176 IPR035513 -
Aed2g0909 523 Pfam Plant invertase/pectin methylesterase inhibitor 27 173 IPR006501 GO:0004857
Aed2g0909 523 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0909 Aed-Chr2 7065059 7067190 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0909 1 523 Carbohydrate Esterase AT2G45220 65.143 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0909 K01051 - gmx:100783964 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0909 2 7065059 7067190 Aed2g0909 2 7065059 7067190 ECH