Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0907 ATGGCCACTAATTATTATGCCACCACCACTTTGTTCCTCTTCCTTGCCATGGCCACCACCACCCTTTGCCTCCAATTAGAAACGGATCAAGTGCTCCAAATGGCCCAAAACCATGTTTCTCAAGCTAAGAATTGGGTTGGAAACTCTTTGATTAGATTGCAACATGGCTTGGGAAGCCTAAGTGATGTTTCTGATCATCATCCAACAAGTGCTACTACTATAGCACTGAGAGATTGTGCCAAGCTCTATGAGGAGAGTGATTCTAGGCTCTCTCACATGATCATGTCTCAAAAAGAGAGTAGCTACACCAAAGAAGATGCACTCACATGGGTTAGTGCTGTGATGACAAATCATAGGACTTGTTTGGATGGATTGCAAGAAAAAGGGTATGTTGATGAAGCTCATGTTTTGGACCATAGGAGGAACTTGACCATGTTGCTTAAGCAAGCTCTTGTTTTGTATTCAAAGAATAAAGGCAAAGCCAAAGGGAAAGGACCACTTGATCAGGGAACAATATCCAAATCAGATGGTGCTGGTATTTTAGAACCATGGAGTGAAGAAAGCTATAAGTCAGACTTCACAGTGGCACAGGATGGTTCAGGGACACACAGAACAATCCAAGCAGCAGTAAACGCACTTGCTGCAATGGGGCACAACCGTCCTGCAAGAGCAATCATACATGTAAAATCAGGGGTCTACAATGAAAAGGTGAAAATTGGACAGAAACTGCATAATGTCATGCTTGTAGGAGATGGCATAGACAAAACTATTGTCACTGGCAACAGAAATGTTGCTCAAGGTTCCACCACTCTCAACTCAGCCACATTTGATGTATCAGGGGACGGATTCTGGGCCAAAGACATGACATTCGAGAACACAGCAGGCCCAGAGAAGCACCAAGCAGTGGCACTGAAGTCAAGCTCAGACTTATCAGTCTTCTTCATGTGCAACTTCAAAGGCTACCAAGACACCCTCTATGTCCACTCAAACCGCCAATTCTACAGAGACTGCCACATACACGGCACCATAGACTTCATCTTCGGAGACGCCACAGTTGTTCTTCAAAACTGCGACATCCTCGTGAGGAAGCCATTGATGCACCAATCCAACTTCATCACAGCACAGGGAAGAGACGACCCTAATGAGAACACAGGAATCTCAATTCAAGGCTGTAGGATTAGACCAGATTCTGAGGGTTCATATTCCCAAAACACGTTTTTGGGAAGGCCTTGGAGGAAGTACTCTAGGGTTGTGTTTCTTAAGAGTGATTTGGATGGCTTGGTTAACCCTAGAGGGTGGGCTGAGTGGAGTGGTGAGTTTGCACTCTCTACTTTGTACTATGGTGAGTATTTGAACAGTGGTGGAGGTGCTTCTACAGAAAGTAGGGTTGGTTGGAAGGGCTTTCATGTCATGAAGAGTGCTGCTGAGGCCTCACCCTTCACTGTGGGCCAGTTTCTGCAGGGTGAGAGTTGGATTCCTGCTACTGGAGTGCCTTTCTCTTCTGGGGTTTGA 1512 0.4563 MATNYYATTTLFLFLAMATTTLCLQLETDQVLQMAQNHVSQAKNWVGNSLIRLQHGLGSLSDVSDHHPTSATTIALRDCAKLYEESDSRLSHMIMSQKESSYTKEDALTWVSAVMTNHRTCLDGLQEKGYVDEAHVLDHRRNLTMLLKQALVLYSKNKGKAKGKGPLDQGTISKSDGAGILEPWSEESYKSDFTVAQDGSGTHRTIQAAVNALAAMGHNRPARAIIHVKSGVYNEKVKIGQKLHNVMLVGDGIDKTIVTGNRNVAQGSTTLNSATFDVSGDGFWAKDMTFENTAGPEKHQAVALKSSSDLSVFFMCNFKGYQDTLYVHSNRQFYRDCHIHGTIDFIFGDATVVLQNCDILVRKPLMHQSNFITAQGRDDPNENTGISIQGCRIRPDSEGSYSQNTFLGRPWRKYSRVVFLKSDLDGLVNPRGWAEWSGEFALSTLYYGEYLNSGGGASTESRVGWKGFHVMKSAAEASPFTVGQFLQGESWIPATGVPFSSGV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0907 503 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 155 IPR035513 -
Aed2g0907 503 Pfam Pectinesterase 192 489 IPR000070 GO:0030599|GO:0042545
Aed2g0907 503 PANTHER PECTINESTERASE 9 502 - -
Aed2g0907 503 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 9 502 - -
Aed2g0907 503 SUPERFAMILY Pectin lyase-like 190 502 IPR011050 -
Aed2g0907 503 CDD PMEI-like_4 8 155 - -
Aed2g0907 503 Gene3D - 186 503 IPR012334 -
Aed2g0907 503 TIGRFAM PME_inhib: pectinesterase inhibitor domain 37 155 IPR006501 GO:0004857
Aed2g0907 503 ProSitePatterns Pectinesterase signature 2. 339 348 IPR033131 -
Aed2g0907 503 Pfam Plant invertase/pectin methylesterase inhibitor 61 152 IPR006501 GO:0004857
Aed2g0907 503 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 156 IPR035513 -
Aed2g0907 503 SMART PMEI_2 30 153 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0907 Aed-Chr2 7040438 7045003 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0907 10 503 Carbohydrate Esterase AT3G60730 51.527 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0907 K01051 - gmx:100792852 775.007