Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0866 ATGGAAGCCAGAGAAGGTATTAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCTTATCACGTGGCGCCGAGGAGTGAAGCTCCGAATCAGGTTCATGTCCCTGATGGTGCTGGTGCTGCTGCAGCTGCACCTGTTGGCGTCTCACCTGTGATTGTGGGGTTGGATGGAACAGTTAAGAAGAAACGAGGCAGACCCAGGAAATATGGGCCTGATGGGTCTGTCACCATGGCATTGTCACCAATGCCAATCTCGTCTTCTGCTCCGCATTCTAATGACTTTTTGTCTGGGAAGCGGGGCAAAATGCGAGGGATGGACTATAAGCAGTCAAAAAAAGTTGGTTTGGAATATCTAGGTGACTTGAATGCATGCTCTGATGGGACAAATTTTATGCCGCATATCATCACTGTCAATGCTGGCGAGGACATTACAATGAAGGTGATATCCTTTTCTCAACAAGGGCCACGAGCTATATGTATCTTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGCACTTTAACTTATGAGGGCCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGGTCCGGTGGAATGTCTGTCTCGTTGGCTAGCCCTGATGGCCGTGTTGTAGGTGGTGGAGTTGCTGGTCTTCTTGTAGCCGCCAGCCCTGTGCAGGTGGTGGTGGGAAGCTTTTTACCAAGCAGCCAGCAAGAACAGAAAATAAAGAAGCCCAAGTCTATTGATTTTGCACCGGCAATTGTTACTTCAGCCATTGCAGTAGTGTCTTCTACACCACAACCACCACCTCCAACCAATGCTGAAAAAGAGGATGTGAATGTGAATATGAATGTCATGGGTGGTGGAGCACATCATGTACTTCAAAATTCTGGAACCCTTAACTCTAATAATAATAACCTCACTCCTCCCAATGCCTTCAGAAGAGACAACTGGGTCAACATGCACTCCATGCCGGACTCGAGAAAGTCAGCTACTGATATTAACATATCTTTGCCTGATAGTTAA 1071 0.4678 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGAGAAAAAPVGVSPVIVGLDGTVKKKRGRPRKYGPDGSVTMALSPMPISSSAPHSNDFLSGKRGKMRGMDYKQSKKVGLEYLGDLNACSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSSQQEQKIKKPKSIDFAPAIVTSAIAVVSSTPQPPPPTNAEKEDVNVNMNVMGGGAHHVLQNSGTLNSNNNNLTPPNAFRRDNWVNMHSMPDSRKSATDINISLPDS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0866 356 Gene3D - 134 262 - -
Aed2g0866 356 MobiDBLite consensus disorder prediction 82 103 - -
Aed2g0866 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Aed2g0866 356 CDD DUF296 134 224 IPR005175 -
Aed2g0866 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 355 IPR039605 GO:0003680
Aed2g0866 356 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 355 - -
Aed2g0866 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 251 - -
Aed2g0866 356 ProSiteProfiles PPC domain profile profile. 129 271 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0866 Aed-Chr2 6636803 6642524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0866 10 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.863 2.34e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0866 - - gmx:100793726 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0815 3 5831243 5836450 Aed2g0866 2 6636803 6642524 PCT