Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0863 ATGGATTACTATTGTGGGGGTGGTAACAACAACAACAACAAGCTGATTGGTGGAACTAGTAGCGGTGGTGGGCCTTGTGGTGCTTGCAAGTTTCTTAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGAGCAAGGAACAGCACATTTTGCAGCGGTTCACAAGGTGTTTGGTGCTAGCAATGCCTCGAAGTTACTCTTGAGGATTCCAGCACACAAGCGTCTTGATGCTGTTGTCACTCTTTGCTATGAGGCTCTTGCTAGGGCTAGAGACCCCGTTTATGGCTGTGTCGCTCACCTCTTTGCTCTTCAACAACAGAGAACTTTCAAATGGGTAATTAACAAAGTATAG 366 0.459 MDYYCGGGNNNNNKLIGGTSSGGGPCGACKFLRRKCVKGCIFAPYFDSEQGTAHFAAVHKVFGASNASKLLLRIPAHKRLDAVVTLCYEALARARDPVYGCVAHLFALQQQRTFKWVINKV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0863 121 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 111 - -
Aed2g0863 121 Pfam Lateral organ boundaries (LOB) domain 25 111 IPR004883 -
Aed2g0863 121 ProSiteProfiles LOB domain profile. 24 121 IPR004883 -
Aed2g0863 121 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 8 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0863 Aed-Chr2 6613354 6613801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0863 15 111 AS2 family AT4G00210 77.320 6.26e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed2g0863 LOB 7.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0863 - K21994 cqi:110714113 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0813 3 5801251 5804563 Aed2g0863 2 6613354 6613801 PCT