Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0859 ATGGATCCTGTAGCAGCACAAGGACGACCTCTCCCTCCACCTTTTCTCACTAGAGATCTTCACTTACACCCTCACCACCAATTCCAGCCTCACCATAGCCACCAGAACACCGAAGACGATGCCACCGGCAATGGTCGCAGTCAGAAGCGTGACCGCGACGAGAACGCCGGCGGAGGCGGGGGCGTTAGCGGGGACACCACGCCCCCGCATGCCGGCGGAGAAGGGAAGGATCCCGGGTCAGGAGACGGAGGAGGGAGTGATCAAATGGGGAGAAGGCCTAGAGGAAGACCAGCAGGGTCCAAAAACAAGCCGAAACCACCCATTATCATCACCAGAGACAGTGCCAACGCCCTCCGATCCCATGTCATGGAAATCGCCAACGGCTGCGACATCATGGAGAGCGTCACCGCCTTTGCGAGGCGGCGGCAGCGCGGCATCTGCGTGCTCAGCGGCAGCGGCACCGTCACCAACGTCACTCTCCGGCAGCCAGCCTCGCCAGGTGCCGTCGTGACCCTTCATGGAAGGTTTGAGATTCTGTCCCTGTCCGGTTCGTTCCTGCCGCCGCCTGCCCCGCCTGCAGCGTCAGGGCTAGCCATATATCTGGCTGGCGGACAGGGACAGGTAGTAGGTGGAAGTGTGGTGGGACCCCTTGTGGCCTCAGGTCCTGTTGTCATCATGGCTGCCTCATTTGGTAATGCTGCTTATGAAAGACTTCCCTTAGAGGAAGAGGAAACTCCGGTGCCAGGTTCTGGCACCGGAGGATTAGGATCCCCGGGAATCCCTGGCACTCAGCAACAACCGCAATCGCAGCCGCAACAGCAGCAACAACAACAGCAGCTCGTGGGAGATCCCAATAACTCTTCTCTTTTCCATGGAGTCCCTCAGAATCTTCTCAATTCTGTTCAATTACCAGCTGAGGGCTATTGGGGTGGCAGTGCTCGCCCTTCCTTTTAA 954 0.587 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHSHQNTEDDATGNGRSQKRDRDENAGGGGGVSGDTTPPHAGGEGKDPGSGDGGGSDQMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGCDIMESVTAFARRRQRGICVLSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLVASGPVVIMAASFGNAAYERLPLEEEETPVPGSGTGGLGSPGIPGTQQQPQSQPQQQQQQQQLVGDPNNSSLFHGVPQNLLNSVQLPAEGYWGGSARPSF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0859 317 MobiDBLite consensus disorder prediction 257 294 - -
Aed2g0859 317 PIRSF ESCAROLA 16 317 IPR014476 GO:0003680
Aed2g0859 317 MobiDBLite consensus disorder prediction 242 294 - -
Aed2g0859 317 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 247 - -
Aed2g0859 317 Gene3D - 118 246 - -
Aed2g0859 317 CDD DUF296 119 230 IPR005175 -
Aed2g0859 317 MobiDBLite consensus disorder prediction 19 56 - -
Aed2g0859 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 231 IPR005175 -
Aed2g0859 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 317 IPR014476 GO:0003680
Aed2g0859 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 317 - -
Aed2g0859 317 ProSiteProfiles PPC domain profile profile. 115 253 IPR005175 -
Aed2g0859 317 MobiDBLite consensus disorder prediction 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0859 Aed-Chr2 6563648 6564601 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0859 1 317 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 63.939 6.54e-90 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0859 - - gmx:100816243 459.144