LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed2g0848	ATGGAAGCTAAGCCTCTTCGGATTGTTCCCTCTTCACACAACACTTCTGAAGGTGGACCCCAGAAGAAGATTGACATGGGACACGAGATGGAAGGTGTTGGTGCTGTTGATGAGAGAAAGAGGGTTGTTATGGTCATCAAGGAAGAGAAAGTGAACAACACTTGTTCCAAAAGTGTTGAACTTCATCTCGGGTTTGATGCTTCTCATTCTGCTCCACAAGATGTGATTACTGAAGCTCAGAGGCGTGAGCTTCACCATCAAGTTTTCATCTTCAACCATTTGGCATATAAACTTCCTCCTCCTTATCACCTTATGCAATTCCCAACCAACATGTCAGAATACAGTTTCCTTGGTTTTGATCATGGGAGTGTGGTGGATCCAGAGCCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGTGGTAAGAATGTGGTGCCTAACCAGAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAACTTAACTCCCCTTTGGCTACAAAGCCTTCTAGCAAGGCACATAGCAAACAAGCCTCAAAGACACAATTTGAAATTTCAAATCCAAACCTTATGGCCATTCCACCTGGTGTTGTCAATTTCTCTTCTGCTAATAATAGGTCGAAAAATAGTGTAAGTTATGCCGACTACCTCACGTCGTTTTCTTCTGCATCCAGGGTGTCTCCTGGCTCCACTCTTGCCGCTGCAGTTTCCCCTAAGACTGCCGCCATCTTCAGCAGCATGGCAGCATCGGTTGCTTCAGATAGCAAAAGTTGCTTAAATATATGCCAAAAAGATTACCAGTCCAAGAGCTGTATCAGCAACAACATCAGTGTTAAAAGGGGTGGGAAAGGAAGCATTTTTGGTGATACTAATACTAATACTAATGGCATCTCTACTGGAATAGGCTTCTCCCCAACGAGTGTTCTTCAAGTTTCCGGTTGCAACCCTTCATATCTGAATGACAGAACAAACATAGAACCTGCAGCTGGTAGGTGCCGGAGAACAGACGGTAAGAAGTGGCAGTGCAAGAGTGCCGTTCTTCCCGGTCAGAAGTACTGTGCCACGCACATGCACAGGGGTGCCAAAAAGCGTCTCACAAGCCATGAACCACCACCAGCAGCAGCTACTGCTCCTAGTTCCGCGGTTACCGTTGCGCGGTTGCCTTGCTCTTCGGCCGCCACAACTAACACACAGAAAGCGAAAGCACATTGTGCGATTCCGAACACAAACCTTTCCATTTCAGTCCCAGCAAGTGATCATCCATTCATACTACAAAGTAATGAGAAAAGTCAAAGTAGCAGTGACACTGATACCACCATCAGTGACACCTTGAATGAGTGTAGCTATGCTTCTTTCTGA	1395	0.4566	MEAKPLRIVPSSHNTSEGGPQKKIDMGHEMEGVGAVDERKRVVMVIKEEKVNNTCSKSVELHLGFDASHSAPQDVITEAQRRELHHQVFIFNHLAYKLPPPYHLMQFPTNMSEYSFLGFDHGSVVDPEPHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPVETSQLNSPLATKPSSKAHSKQASKTQFEISNPNLMAIPPGVVNFSSANNRSKNSVSYADYLTSFSSASRVSPGSTLAAAVSPKTAAIFSSMAASVASDSKSCLNICQKDYQSKSCISNNISVKRGGKGSIFGDTNTNTNGISTGIGFSPTSVLQVSGCNPSYLNDRTNIEPAAGRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRLTSHEPPPAAATAPSSAVTVARLPCSSAATTNTQKAKAHCAIPNTNLSISVPASDHPFILQSNEKSQSSSDTDTTISDTLNECSYASF	464

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed2g0848	464	MobiDBLite	consensus disorder prediction	154	198	-	-
	Aed2g0848	464	ProSiteProfiles	QLQ domain profile.	75	110	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Aed2g0848	464	MobiDBLite	consensus disorder prediction	1	25	-	-
	Aed2g0848	464	PANTHER	-	54	269	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Aed2g0848	464	ProSiteProfiles	WRC domain profile.	338	383	IPR014977	-
	Aed2g0848	464	MobiDBLite	consensus disorder prediction	372	391	-	-
	Aed2g0848	464	Pfam	WRC	340	380	IPR014977	-
	Aed2g0848	464	Pfam	WRC	127	169	IPR014977	-
	Aed2g0848	464	PANTHER	-	328	437	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Aed2g0848	464	PANTHER	GROWTH-REGULATING FACTOR 9	328	437	-	-
	Aed2g0848	464	PANTHER	GROWTH-REGULATING FACTOR 9	54	269	-	-
	Aed2g0848	464	MobiDBLite	consensus disorder prediction	167	198	-	-
	Aed2g0848	464	ProSiteProfiles	WRC domain profile.	126	170	IPR014977	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed2g0848	Aed-Chr2	6494622	6498875	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed2g0848	79	404	GRF Transcription Factor Family	AT2G45480	32.708	1.40e-38	143

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed2g0848	-		-	gmx:100795050	705.671