Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0844 ATGGACGAAAACCCGAAACGACAATGGTCCCTCAGCGACTTTGAGATCGGAAAGCCTCTCGGCAAAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAAGTCAAGAGCAAATACGTGGTTGCGTTGAAGGTTATTTTCAAGGAACAGCTTGAGAAGTACAGAATCCACCACCAACTGAGGAGGGAGATGGAGATTCAGTTCAGCTTGAACCACGCGAACGTGCTTCGTCTCTATGGTTGGTTTCACGACGCCGAGCGCGTCTATTTGATTCTCGAATATGCTCACAATGGGGAGCTTTACAAGGAGCTTAGCAAAAAAGGGCATTTTAATGAGAAGCAAGCTGCAACGTATATTTTAAGCCTCACAAAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCACAGGGATATCAAGCCTGAAAATTTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCAGTGCAGTCTAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCTGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTTGATAACTGGACTCTGGGTATCCTTTGCTATGAGTTCCTTTATGGTGCCCCTCCATTTGAGGCTGAGAGTCAAGTTGATACCTTTAAAAGGATAATGAAGGTTGACCTGAGTTTCCCTTCTACTCCTTGTGTTTCTGTAGAAGCCAAACATCTTATTAGTCGTCTGCTGGTAAAAGACTCTTCACGAAGGCTCTCACTTCAGAGGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATGCTATGGGTGTATGCAACTAA 831 0.4404 MDENPKRQWSLSDFEIGKPLGKGKFGRVYVAREVKSKYVVALKVIFKEQLEKYRIHHQLRREMEIQFSLNHANVLRLYGWFHDAERVYLILEYAHNGELYKELSKKGHFNEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAESQVDTFKRIMKVDLSFPSTPCVSVEAKHLISRLLVKDSSRRLSLQRIMEHPWIIKNANAMGVCN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0844 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Aed2g0844 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Aed2g0844 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 3 275 IPR030616 GO:0004672
Aed2g0844 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Aed2g0844 276 PIRSF ILK 3 269 - -
Aed2g0844 276 Gene3D Transferase(Phosphotransferase) domain 1 98 273 - -
Aed2g0844 276 CDD STKc_Aurora 13 265 - -
Aed2g0844 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0844 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0844 276 SUPERFAMILY Protein kinase-like (PK-like) 8 268 IPR011009 -
Aed2g0844 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0844 Aed-Chr2 6481620 6484025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0844 6 268 CBL-interacting serine-threonine protein kinases AT5G10930 38.889 1.67e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Aed2g0844 Pkinase 1.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0844 K08850 - gmx:100775802 540.421