Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0836 ATGGACTACTTTCTACCACTTCTACTAATCACCATAGTGTGGATAAGCATTCATGTGCTCATCTCCACCTTCAAACCACTCAAATCCTCTAAAACTCCACCAGGGCCTCGTCCTTTTCCAATCATAGGAAACATATTGGAGCTTGGAAAACAACCTCACCAAGCACTAGCCAAACTTTCTCAAATTTACGGTCCTATAATGAGTCTTAAGCTTGGTAGCACTACCACCATAGTCATTTCCTCTCCACAAGTTGCCAAAGAAGTACTGCATAAAAATGATCAAATTTTCGCTAATAGGGCGGTCCCAGATACTCTCAGAGCTCTTGATCATCACATACTTTCAGTGGTGTGGATGCCACCTTTAGCACAATGGAGGATTCTAAGGAGAGCTTGTGCCACCAAAGTGTTCTCTACTCAGCAGCTTGATTCCACACAAGTTCTTCGCCAAAGGAAGGTGAAAGAGTTGATGGATTATGTCAAGGAAAGATGCAAGAAAGGTGAAGCTTTGGATATTGGTGAGGCTTCTTTTACAACTGTGCTTAATTCCATATCAAACACTTTCTTCTCAAAGGATTTGGCTCATTACACTTCTGATAAGTCTCAAGAGTTCAAGGACATCATTTGGGGTGTCATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTCTTCCCAATCTTTCGCCTGATTGATCCACAAGAAAATGAATCCAAGGCAAGCAATGATGTGTTAGATTCTGTGCTGGAAGTCATGCTTGAAGAGAATTCACAAGTGACTCGCCCTCATGTTTTGCATTTGTTTTTTGATTTATTTGTGGCTGGAATTGACACAACATCAAGCACAATAGAATGGGCAATGGCTGAGTTGCTACGAAACCCGGAAAAACTAGAAAAGGTTAGAAAAGAGCTTCAACAAGTCCTTGCAAAAGATGAACAACTAGAAGAATCACATATGTTGAACCTTCCTTACCCACAAGCAGTGGTGAAAGAAACTTTTCGCTTGCATCCACCAATTCCAATGCTAGTGCCACACAAATCAGAAGTTGATGTTGAACTATGTGGCTTCATGGTGCCTAAAAGTGCACAAATTCTAATCAATGTATGGGCCACAGGAAGAAATTCAAGTGTTTGGAGAAACCCAATTGAGTTTAGACCCGAAAGATTCTTGGAAAGTGGTGACATTGATTTTAAAGGCCAAGATTTTGAGTTAATACCCTTTGGAGCTGGAAGAAGGATATGTCCTGGGTTGCCATTGGCTTCTAGAACAGTGCACATTGTGTTGGCCTCTCTTCTTTACAACTATGATTGGAAACTCACTGATGGACAAAAGCCACAGGACATGGATATGTCTGAGAAATCTGGAATTACCTTGCATAAGGCTCAACCTCTTCTAGTCATTCCCATCCAAGCATAA 1410 0.4142 MDYFLPLLLITIVWISIHVLISTFKPLKSSKTPPGPRPFPIIGNILELGKQPHQALAKLSQIYGPIMSLKLGSTTTIVISSPQVAKEVLHKNDQIFANRAVPDTLRALDHHILSVVWMPPLAQWRILRRACATKVFSTQQLDSTQVLRQRKVKELMDYVKERCKKGEALDIGEASFTTVLNSISNTFFSKDLAHYTSDKSQEFKDIIWGVMEEAGRPNVVDFFPIFRLIDPQENESKASNDVLDSVLEVMLEENSQVTRPHVLHLFFDLFVAGIDTTSSTIEWAMAELLRNPEKLEKVRKELQQVLAKDEQLEESHMLNLPYPQAVVKETFRLHPPIPMLVPHKSEVDVELCGFMVPKSAQILINVWATGRNSSVWRNPIEFRPERFLESGDIDFKGQDFELIPFGAGRRICPGLPLASRTVHIVLASLLYNYDWKLTDGQKPQDMDMSEKSGITLHKAQPLLVIPIQA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0836 469 Coils Coil 295 315 - -
Aed2g0836 469 Gene3D Cytochrome P450 23 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 239 - -
Aed2g0836 469 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 233 468 - -
Aed2g0836 469 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 239 - -
Aed2g0836 469 PANTHER CYTOCHROME P450 FAMILY PROTEIN 233 468 - -
Aed2g0836 469 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Aed2g0836 469 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 Pfam Cytochrome P450 236 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g0836 469 Pfam Cytochrome P450 33 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0836 Aed-Chr2 6427279 6429444 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0836 8 468 Cytochrome P450 AT2G45550 47.094 8.45e-166 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0836 - - gmx:100809483 832.017