Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0812 ATGGATGAAGTGGTTTCGGTATTACCAAATCAGTACCGTAAGCTACACACAACTAGATCATGGGACTTTATTGGGTTACCTTTGACTGCTAAGAGAAAACTGAAATCAGAAAGTGACATAATTGTGGCTCTTTTGGATACAGCTTTAAGGACGATGGATTTGGCCCTCCACCTGCTAAATGGAAAGGAACTTGTGATCAATATGCCAATTTTTCAGGCTGCAATAAGTAACATCCCTATTCTACTGCCGGATCCATCTGACTTTGGTCATGGAACTCATACAGCATCAACAGCAGCAGGCAATCTTGTCACCGAAGCAAGCCTCTTTGGAATAGCCAAAGGCACGGCTCGCGGCGCGGTGCTGTCGGCCAGGTTGGCAGTTTACAAAGTCTGCTGGGCAAGTGATGCATGTTCAGACATGGACATACTTGCTGGATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCCGTTTCCATAGGTGGAGGGAATCCAAACTATGTGGAGGACTCTATAGGAATTGGAGCATTTCATGCCATGAGGAAAGGCATCATCACTGTGGCCTCAGCCGGAAATGATGGACCATTTATGGCAACTGTCTCAAATACTGCACCATGGATTGTAACAGTGGCAGCTAGTGGCATTGATAGGGATTTCCGGAGCACTATTCAGTTGGGGAGTGGAAATAATGTTACTCACCTAGTTAAGCTTTCTTTCCATATTAACAAAGTAACATTTCAATGCATTGACAGATTCTGCTATGAAGACTCCTTAGAGCCTAAAAAGGTGAAAGGAAAACTTGTATATTGTAGATTAAGTACTTGGGGCAGTGAAGCTGTTGTGAAAGCAATTGGAGGCATTGGCACTATAATAGAAAGTGAACAAGTTTTTGAAATTGCCCAAATGTTCATGGCTCCAGCTACCATTGTGAATAGTAGCATAGGCCAAATTATTACCAATTATACACAGTCCACAAGGTCACCATCAGCAGTAATACATAAGAGCCATGAAGTGAAAATTCCAGCTCCATTTGCTGCTTCATTTTCATCTAGGGGTCCAAATCCAGGATCTCAACATATTCTCAAGCCTGATGTTACAGCTCCTGGCATTAACATCTTGGCATCTTATACACCTATGAAGTCAATTACTGGTCAGAAAGGGGATAATCAATTTTCAGAATTTACACTTATGTCTGGAACTTCTATGTCATGCCCTCATGTTGCTGGAGTAGCAGCATATGTGAAGTCATTTCACCCAGATTGGACTCTTGCTGCAATCAGATCAGCTATTATTACCACAGAATTTGCATATGGTGGTGGTCAAGTGAACCCTACAAGAGCTCTAAACCCTGGTTTAGTCTATGACATGGATGACTTTGCATATATCCAGTTCTTATGCCATGAGGGCTATAACGGTTCCTCTCTATCAGTGTTAGTTGGCTCTTCAGTGAATTGCACCTCTTTGATTCCAGGACTTGGCCATGATGCTATCAACTATCCCACCATGCAACTAAGTGTGCAAAACAACAACACAGGAACAACAACAGTAGGAGTTTTCAGGAGAAGAGTGACCAATGTTGGTCCTGCTGCTCCAACTATCTTCAATGCCACTATTAAATCTCCCAAAGGAGTGGAAATCACAGTGAGGCCTACTAGCCTCATTTTCTCTCACACCCTGCAGAAGAAGAGCTTCAAGGTAGTGGTGAAAGCAAAACCTATGGCAAGCATGAAAGTTATGTCAGGTTCCCTTATTTGGAGAAGTTCACGTTACATTGTTAGAAGCCCCATTGTTTTTTGGACCAACAACAAGGAGAACATAGGTGATGTTGAAGCCTTGAATTTTGTGAGATAA 1854 0.425 MDEVVSVLPNQYRKLHTTRSWDFIGLPLTAKRKLKSESDIIVALLDTALRTMDLALHLLNGKELVINMPIFQAAISNIPILLPDPSDFGHGTHTASTAAGNLVTEASLFGIAKGTARGAVLSARLAVYKVCWASDACSDMDILAGFEAAIHDGVDVISVSIGGGNPNYVEDSIGIGAFHAMRKGIITVASAGNDGPFMATVSNTAPWIVTVAASGIDRDFRSTIQLGSGNNVTHLVKLSFHINKVTFQCIDRFCYEDSLEPKKVKGKLVYCRLSTWGSEAVVKAIGGIGTIIESEQVFEIAQMFMAPATIVNSSIGQIITNYTQSTRSPSAVIHKSHEVKIPAPFAASFSSRGPNPGSQHILKPDVTAPGINILASYTPMKSITGQKGDNQFSEFTLMSGTSMSCPHVAGVAAYVKSFHPDWTLAAIRSAIITTEFAYGGGQVNPTRALNPGLVYDMDDFAYIQFLCHEGYNGSSLSVLVGSSVNCTSLIPGLGHDAINYPTMQLSVQNNNTGTTTVGVFRRRVTNVGPAAPTIFNATIKSPKGVEITVRPTSLIFSHTLQKKSFKVVVKAKPMASMKVMSGSLIWRSSRYIVRSPIVFWTNNKENIGDVEALNFVR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0812 617 SUPERFAMILY Subtilisin-like 15 453 IPR036852 GO:0004252|GO:0006508
Aed2g0812 617 ProSiteProfiles Serine proteases, subtilase domain profile. 20 461 - -
Aed2g0812 617 Pfam Subtilase family 39 435 IPR000209 GO:0006508|GO:0008236
Aed2g0812 617 Gene3D - 217 339 - -
Aed2g0812 617 Gene3D Peptidase S8/S53 domain 88 459 IPR036852 GO:0004252|GO:0006508
Aed2g0812 617 PRINTS Subtilisin serine protease family (S8) signature 399 415 IPR015500 -
Aed2g0812 617 PRINTS Subtilisin serine protease family (S8) signature 37 56 IPR015500 -
Aed2g0812 617 PRINTS Subtilisin serine protease family (S8) signature 86 99 IPR015500 -
Aed2g0812 617 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 49 IPR045051 -
Aed2g0812 617 Pfam Fibronectin type-III domain 498 598 IPR041469 -
Aed2g0812 617 Gene3D - 466 601 - -
Aed2g0812 617 CDD PA_subtilisin_like 251 333 - -
Aed2g0812 617 ProSitePatterns Serine proteases, subtilase family, serine active site. 400 410 IPR023828 -
Aed2g0812 617 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 84 578 - -
Aed2g0812 617 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 84 578 IPR045051 -
Aed2g0812 617 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 2 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0812 Aed-Chr2 6208358 6219255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0812 1 434 Subtilisin-like Serine Gene Family AT4G00230 57.113 6.81e-171 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0812 - - ccaj:109800351 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0812 2 6208358 6219255 Aed3g0787 3 5552747 5557888 PCT