Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0811 ATGGCTATGGCTGCAAATGAAGATGCTGCACAGGAATTTGCACCAAAGAAGAAGCCACCTTCAGAGGATGAAAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCTTTGATGAGGCCTGGTGGGGGTGATGCTGTACCTTCAGAGGGTGACCAGATTATCTATCACTGCACAATTCGAACTTTGGATGGAGTACTTGTAGAATCTACCAGATCTAACTATGGAGGCAAGGGCACTCCAATAAGACATGTTTTGGGCAAAAGCAAGATGTTATTGGGCTTGCTAGAAGGAATTTCAACAATGTTGAAGGGTGAAGTGGCAATGTTTAAGATGAAGCCTCAGTTGCATTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATGGTTTTCCTAAAGATGATGAACTTCATTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGCAAGGATGTCAACTTTGACTTTTGTTGTTACTGATGATTTGGGAGTTGTAAAAAAGGGTTGGGAATCTCCAAGAGAACCTTACGAAGTGAAGGCTTGGATTTCAGCAAAGACAGCTACTGGGAAATTGATCCTGTCACATACTGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGCAATAGGAACGATGGTTCGGGAAGAGAAGGCTGCTATATATGTTACCAGTCAGTATTTATCTGAGTCTCCTCTGATTCCTGTGATAGAAGATTATGATGAAGTTCATTTTGAAGTGGAGCTGGTTCGCTTTATTCAGGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGTCGAATTCGTGATGGCGAAGGTGATTTTCCTATGGATTGTCCCCTTCATGACAGTCTACTTCGCGTTCATTACAAGGGTACTGTTCTCAATGAAGAAAAGAAAGTATTTTATGATACAAGGGTAGACAATGATGGTCAGCCATTGGAGTTTTGTTCTGGAGAAGGGCTTGTACCGGAGGGATTTGAAATGAGTGTCCGTCTGATGCTTCCTGGAGAGATAGCTCTTGTAACATGCCCTCCTGACTATGCTTATGATAAGTTTCCAAGGCCTGTAAATATCCCTGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTTGGTTTTGAGACGCCAAAGGACTGGGCTGGAATGGACTTTAAAAGTATAATGGATGATGCTGAAAACATCAGAAACACAGGTAACAGGTTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCTCAAGATGACGAAGAAGGAAAAGTTTTTGTAGACACACGTAATTTGCTACACCTGAATGTTGCTGCATGCAATCTAAAATTGGGAGAATGCAAAAAGTCCATTGAGACTTGCAATAAGGTTTTGGAAGCAAATCCTGCACATGTCAAGGGTCTTTACCGTCGTGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCAAGGGCTGATTTCAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGCAGAAGGAGCAGGAAGTTGAGAAGAAAGCTAGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCAGGAGAAATTGCAGAAGTTAAAACTGATGAAGATGGAGATAAAAAAAGTCCAATGGATGATGAAGTACACAGCGACTTGGATGGAACAAAATCAGAGGATTCACATGAAGCTCCACCCGAGGCACGTCAAGCGGGTTGGTTCTCTCTCTTTTGGCCTTCTGGCAGAAGAATTTTTGAATCTCTTGGGCTTAATAGATGTACCATACTTTAA 1872 0.414 MAMAANEDAAQEFAPKKKPPSEDEKRKKKIVPGSLMKALMRPGGGDAVPSEGDQIIYHCTIRTLDGVLVESTRSNYGGKGTPIRHVLGKSKMLLGLLEGISTMLKGEVAMFKMKPQLHYGEDDCPISAPDGFPKDDELHFEIELIEFFKAKARMSTLTFVVTDDLGVVKKGWESPREPYEVKAWISAKTATGKLILSHTEGEPYFFTFGKSEVPKGLEMAIGTMVREEKAAIYVTSQYLSESPLIPVIEDYDEVHFEVELVRFIQVRDMLGDGRLIKRRIRDGEGDFPMDCPLHDSLLRVHYKGTVLNEEKKVFYDTRVDNDGQPLEFCSGEGLVPEGFEMSVRLMLPGEIALVTCPPDYAYDKFPRPVNIPEGAHIQWEIELLGFETPKDWAGMDFKSIMDDAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFVDTRNLLHLNVAACNLKLGECKKSIETCNKVLEANPAHVKGLYRRGMAYMAAGDFEEARADFKMMMKVDKSTESDATAALQKLKQKEQEVEKKARKQFKGLFDKKPGEIAEVKTDEDGDKKSPMDDEVHSDLDGTKSEDSHEAPPEARQAGWFSLFWPSGRRIFESLGLNRCTIL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0811 623 MobiDBLite consensus disorder prediction 11 29 - -
Aed2g0811 623 Gene3D - 266 386 IPR046357 GO:0003755
Aed2g0811 623 SUPERFAMILY FKBP-like 169 263 - -
Aed2g0811 623 Coils Coil 521 544 - -
Aed2g0811 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Aed2g0811 623 SMART tpr_5 453 486 IPR019734 GO:0005515
Aed2g0811 623 SMART tpr_5 487 520 IPR019734 GO:0005515
Aed2g0811 623 SMART tpr_5 404 437 IPR019734 GO:0005515
Aed2g0811 623 SUPERFAMILY FKBP-like 27 152 - -
Aed2g0811 623 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 69 576 IPR031135 GO:0030154|GO:0042761|GO:0099402
Aed2g0811 623 MobiDBLite consensus disorder prediction 557 598 - -
Aed2g0811 623 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Aed2g0811 623 MobiDBLite consensus disorder prediction 557 593 - -
Aed2g0811 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 296 384 IPR001179 GO:0003755
Aed2g0811 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 175 261 IPR001179 GO:0003755
Aed2g0811 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 145 IPR001179 GO:0003755
Aed2g0811 623 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 69 576 - -
Aed2g0811 623 Pfam Tetratricopeptide repeat 488 511 IPR019734 GO:0005515
Aed2g0811 623 Gene3D - 153 265 IPR046357 GO:0003755
Aed2g0811 623 Gene3D - 1 152 IPR046357 GO:0003755
Aed2g0811 623 SUPERFAMILY TPR-like 400 543 IPR011990 GO:0005515
Aed2g0811 623 Gene3D Tetratricopeptide repeat domain 398 552 IPR011990 GO:0005515
Aed2g0811 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 148 IPR001179 GO:0003755
Aed2g0811 623 SUPERFAMILY FKBP-like 269 396 - -
Aed2g0811 623 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0811 Aed-Chr2 6192357 6200743 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0811 48 552 Calmodulin-binding Proteins AT5G48570 30.518 1.37e-57 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0811 - - gmx:100818201 1125.15